RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
CCS-202ENST00000525435 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
CCS-202ENST00000525435 IGKV5-2P06315 115 aa15.72■□□□□ 0.11
CCS-202ENST00000525435 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
CCS-202ENST00000525435 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
CCS-202ENST00000525435 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
CCS-202ENST00000525435 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
CCS-202ENST00000525435 NUP98P52948 1817 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 RIC1Q4ADV7 1423 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 NEURL1BA8MQ27 555 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 F6X3S4 739 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
CCS-202ENST00000525435 DPEP1P16444 411 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 NUTM1Q86Y26 1132 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 NLGN2Q8NFZ4 835 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 PIM2Q9P1W9 311 aa15.71■□□□□ 0.11
CCS-202ENST00000525435 NOB1Q9ULX3 412 aaKnown RBP15.71■□□□□ 0.11
CCS-202ENST00000525435 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.1
CCS-202ENST00000525435 KCNA3P22001 575 aa15.7■□□□□ 0.1
CCS-202ENST00000525435 GCKRQ14397 625 aa15.7■□□□□ 0.1
CCS-202ENST00000525435 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
CCS-202ENST00000525435 C2CD5Q86YS7 1000 aa15.7■□□□□ 0.1
CCS-202ENST00000525435 H7C1W4 665 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 SRGNP10124 158 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 NPR1P16066 1061 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 STYK1Q6J9G0 422 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 MASTLQ96GX5 879 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
CCS-202ENST00000525435 SRCIN1Q9C0H9 1055 aa15.69■□□□□ 0.1
CCS-202ENST00000525435 BCAR3O75815 825 aa15.68■□□□□ 0.1
CCS-202ENST00000525435 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
CCS-202ENST00000525435 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
CCS-202ENST00000525435 SLC4A10Q6U841 1118 aa15.68■□□□□ 0.1
CCS-202ENST00000525435 CCDC24Q8N4L8 307 aa15.68■□□□□ 0.1
CCS-202ENST00000525435 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
CCS-202ENST00000525435 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 IRS4O14654 1257 aaPredicted RBP15.67■□□□□ 0.1
CCS-202ENST00000525435 CHRNA5P30532 468 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 ALDH1B1P30837 517 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
CCS-202ENST00000525435 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
CCS-202ENST00000525435 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
CCS-202ENST00000525435 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 RCAN3Q9UKA8 241 aa15.67■□□□□ 0.1
CCS-202ENST00000525435 GRIN3BO60391 1043 aa15.66■□□□□ 0.1
CCS-202ENST00000525435 HCLS1P14317 486 aaPredicted RBP15.66■□□□□ 0.1
CCS-202ENST00000525435 SYNE4Q8N205 404 aa15.66■□□□□ 0.1
CCS-202ENST00000525435 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
CCS-202ENST00000525435 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
CCS-202ENST00000525435 ABCC12Q96J65 1359 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 GRM8O00222 908 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 PDE8AO60658 829 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 GPR162Q16538 588 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
CCS-202ENST00000525435 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.11e-6■□□□□ 10.5
CCS-202ENST00000525435 RBM17Q96I25 401 aaKnown RBP15.65■□□□□ 0.1
CCS-202ENST00000525435 CRAMP1Q96RY5 1269 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 PLA2G12BQ9BX93 195 aa15.65■□□□□ 0.1
CCS-202ENST00000525435 MS4A1P11836 297 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 TRIM27P14373 513 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 CASP7P55210 303 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 INTS3Q68E01 1043 aaKnown RBP15.64■□□□□ 0.09
CCS-202ENST00000525435 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
CCS-202ENST00000525435 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
CCS-202ENST00000525435 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 ARFGEF2Q9Y6D5 1785 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 UTYO14607 1347 aa15.64■□□□□ 0.09
CCS-202ENST00000525435 BBOX1O75936 387 aa15.63■□□□□ 0.09
CCS-202ENST00000525435 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
CCS-202ENST00000525435 ANKRD36CQ5JPF3 1778 aa15.62■□□□□ 0.09
CCS-202ENST00000525435 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
CCS-202ENST00000525435 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
CCS-202ENST00000525435 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
CCS-202ENST00000525435 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
CCS-202ENST00000525435 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
CCS-202ENST00000525435 ABCC4O15439 1325 aa15.62■□□□□ 0.09
CCS-202ENST00000525435 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
CCS-202ENST00000525435 CC2D2BQ6DHV5 1058 aa15.61■□□□□ 0.09
CCS-202ENST00000525435 C3orf67Q6ZVT6 689 aa15.61■□□□□ 0.09
CCS-202ENST00000525435 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
CCS-202ENST00000525435 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
CCS-202ENST00000525435 CSF1RP07333 972 aa15.6■□□□□ 0.09
CCS-202ENST00000525435 YBX3P16989 372 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCS-202ENST00000525435 CTSWP56202 376 aa15.6■□□□□ 0.09
CCS-202ENST00000525435 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.6■□□□□ 0.09
CCS-202ENST00000525435 TTLL11Q8NHH1 800 aa15.6■□□□□ 0.09
CCS-202ENST00000525435 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
CCS-202ENST00000525435 JARID2Q92833 1246 aaPredicted RBP15.6■□□□□ 0.09
CCS-202ENST00000525435 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
CCS-202ENST00000525435 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
CCS-202ENST00000525435 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
CCS-202ENST00000525435 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms