RNA–Protein interactions for RNA: ENST00000525432.1

NCAPD3-201, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 343 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-201ENST00000525432 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
NCAPD3-201ENST00000525432 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
NCAPD3-201ENST00000525432 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
NCAPD3-201ENST00000525432 FLIIQ13045 1269 aa13.09□□□□□ -0.31
NCAPD3-201ENST00000525432 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
NCAPD3-201ENST00000525432 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
NCAPD3-201ENST00000525432 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
NCAPD3-201ENST00000525432 RPAP2Q8IXW5 612 aaPredicted RBP13.08□□□□□ -0.32
NCAPD3-201ENST00000525432 HYPKQ9NX55 129 aa13.08□□□□□ -0.32
NCAPD3-201ENST00000525432 IGHDP01880 384 aa13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 HSPA6P17066 643 aa13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 ARFGEF2Q9Y6D5 1785 aa13.07□□□□□ -0.32
NCAPD3-201ENST00000525432 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 PRELPP51888 382 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
NCAPD3-201ENST00000525432 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 H0YIN7 160 aa13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 GNAI3P08754 354 aa13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 RASSF7Q02833 373 aa13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
NCAPD3-201ENST00000525432 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 RGL2O15211 777 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 TOMM70O94826 608 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 G2E3Q7L622 706 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 ZC3H4Q9UPT8 1303 aaKnown RBP13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
NCAPD3-201ENST00000525432 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 NFKBIEO00221 500 aa13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 PDE6BP35913 854 aa13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
NCAPD3-201ENST00000525432 ALDH1L1O75891 902 aa13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 LMNB1P20700 586 aa13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 PDIA6Q15084 440 aa13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 NUP98P52948 1817 aa13.02□□□□□ -0.33
NCAPD3-201ENST00000525432 SRGNP10124 158 aa13.01□□□□□ -0.33
NCAPD3-201ENST00000525432 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
NCAPD3-201ENST00000525432 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
NCAPD3-201ENST00000525432 UTYO14607 1347 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
NCAPD3-201ENST00000525432 HMMRO75330 724 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 NUCB1Q02818 461 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
NCAPD3-201ENST00000525432 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.33
NCAPD3-201ENST00000525432 DCTPP1Q9H773 170 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
NCAPD3-201ENST00000525432 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 C21orf2O43822 256 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 GNAI2P04899 355 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 ST5P78524 1137 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 HLFQ16534 295 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 SRCIN1Q9C0H9 1055 aa12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
NCAPD3-201ENST00000525432 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 CEP85Q6P2H3 762 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
NCAPD3-201ENST00000525432 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 APLP1P51693 650 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 MTX1Q13505 466 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 PRPF40BQ6NWY9 871 aaKnown RBP12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
NCAPD3-201ENST00000525432 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms