RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TJAP1Q5JTD0 557 aa7.37□□□□□ -1.23
USP47-204ENST00000525078 MEI1Q5TIA1 1274 aa7.37□□□□□ -1.23
USP47-204ENST00000525078 SLC9A9Q8IVB4 645 aa7.37□□□□□ -1.23
USP47-204ENST00000525078 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
USP47-204ENST00000525078 PRPF38AQ8NAV1 312 aaKnown RBP7.37□□□□□ -1.23
USP47-204ENST00000525078 SEC16BQ96JE7 1060 aa7.37□□□□□ -1.23
USP47-204ENST00000525078 DNAJC25Q9H1X3 360 aa7.37□□□□□ -1.23
USP47-204ENST00000525078 CCDC85CA6NKD9 419 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 WASLO00401 505 aaPredicted RBP7.36□□□□□ -1.23
USP47-204ENST00000525078 GIPC1O14908 333 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 ZAP70P43403 619 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 NASPP49321 788 aaPredicted RBP7.36□□□□□ -1.23
USP47-204ENST00000525078 APLP1P51693 650 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 FMNL3Q8IVF7 1028 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 STAG2Q8N3U4 1231 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 JDP2Q8WYK2 163 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 SPON2Q9BUD6 331 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 TMX1Q9H3N1 280 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 FANCLQ9NW38 375 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
USP47-204ENST00000525078 CPNE3O75131 537 aaKnown RBP7.35□□□□□ -1.23
USP47-204ENST00000525078 PSMA6P60900 246 aaKnown RBP7.35□□□□□ -1.23
USP47-204ENST00000525078 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 FAM26DQ5JW98 314 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 MYO19Q96H55 970 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 KCTD15Q96SI1 283 aaPredicted RBP7.35□□□□□ -1.23
USP47-204ENST00000525078 COPRSQ9NQ92 184 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 SNTG2Q9NY99 539 aa7.35□□□□□ -1.23
USP47-204ENST00000525078 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
USP47-204ENST00000525078 AMPD3Q01432 767 aa7.34□□□□□ -1.23
USP47-204ENST00000525078 KIAA0825Q8IV33 1275 aa7.34□□□□□ -1.23
USP47-204ENST00000525078 ZNF511Q8NB15 262 aa7.34□□□□□ -1.23
USP47-204ENST00000525078 APPBP2Q92624 585 aa7.34□□□□□ -1.23
USP47-204ENST00000525078 SCHIP1Q9P0W5 487 aaPredicted RBP7.34□□□□□ -1.23
USP47-204ENST00000525078 FAM8A1Q9UBU6 413 aa7.34□□□□□ -1.23
USP47-204ENST00000525078 ERVH48-1M5A8F1 160 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 PDGFRBP09619 1106 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 ETFBP38117 255 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 ERVK-9P63128 1117 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 ERMP1Q7Z2K6 904 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 ETFBKMTQ8IXQ9 262 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 SMC5Q8IY18 1101 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 SH3TC2Q8TF17 1288 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 CPLX3Q8WVH0 158 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 PMM1Q92871 262 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 TRIM52Q96A61 297 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 CEP89Q96ST8 783 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 OSBPL7Q9BZF2 842 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 ETNK1Q9HBU6 452 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 BCCIPQ9P287 314 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP47-204ENST00000525078 EFR3BQ9Y2G0 817 aa7.33□□□□□ -1.24
USP47-204ENST00000525078 A6NJY4 79 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 EIF3JO75822 258 aaKnown RBP7.32□□□□□ -1.24
USP47-204ENST00000525078 USP17L7P0C7H9 530 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 FOXK2Q01167 660 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 DGKZQ13574 1117 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 RAB33AQ14088 237 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 PI16Q6UXB8 463 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 GPR152Q8TDT2 470 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 HNRNPLLQ8WVV9 542 aaKnown RBP7.32□□□□□ -1.24
USP47-204ENST00000525078 NUDT16Q96DE0 195 aaKnown RBP7.32□□□□□ -1.24
USP47-204ENST00000525078 IFT43Q96FT9 208 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 SLC4A9Q96Q91 983 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 C1QTNF2Q9BXJ5 285 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 OSBPL3Q9H4L5 887 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 KBTBD4Q9NVX7 518 aa7.32□□□□□ -1.24
USP47-204ENST00000525078 FAM221BA6H8Z2 402 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 GYS2P54840 703 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 ARSHQ5FYA8 562 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 ODR4Q5SWX8 454 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 FERMT3Q86UX7 667 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 HOMER1Q86YM7 354 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
USP47-204ENST00000525078 EPS8L3Q8TE67 593 aaKnown RBP7.31□□□□□ -1.24
USP47-204ENST00000525078 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 STRIP2Q9ULQ0 834 aa7.31□□□□□ -1.24
USP47-204ENST00000525078 A6NHS1 94 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 PRC1O43663 620 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 ZPR1O75312 459 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
USP47-204ENST00000525078 IRS1P35568 1242 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 RASA3Q14644 834 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 INTS6LQ5JSJ4 861 aaKnown RBP7.3□□□□□ -1.24
USP47-204ENST00000525078 CCDC74AQ96AQ1 378 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 ANAPC16Q96DE5 110 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 GGNBP2Q9H3C7 697 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
USP47-204ENST00000525078 KLK14Q9P0G3 267 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 ZNF232Q9UNY5 417 aa7.3□□□□□ -1.24
USP47-204ENST00000525078 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
USP47-204ENST00000525078 SERTM1A2A2V5 107 aa7.29□□□□□ -1.24
USP47-204ENST00000525078 NRG2O14511 850 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms