RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 GOLGA6L4A6NEF3 574 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 OVOS2Q6IE36 1432 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 AACSQ86V21 672 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 FTOQ9C0B1 505 aaKnown RBP eCLIP15.66■□□□□ 0.1
CAPN1-202ENST00000524773 BOLA2Q9H3K6 86 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 PTPRUQ92729 1446 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
CAPN1-202ENST00000524773 NMIQ13287 307 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-202ENST00000524773 FAM200AQ8TCP9 573 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 USP27XA6NNY8 438 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
CAPN1-202ENST00000524773 MON2Q7Z3U7 1717 aa15.65■□□□□ 0.1
CAPN1-202ENST00000524773 RBM33Q96EV2 1170 aaKnown RBP15.65■□□□□ 0.1
CAPN1-202ENST00000524773 A0A0D9SFI3 127 aa15.65■□□□□ 0.1
CAPN1-202ENST00000524773 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
CAPN1-202ENST00000524773 KRT85P78386 507 aa15.65■□□□□ 0.1
CAPN1-202ENST00000524773 BICD2Q8TD16 824 aa15.65■□□□□ 0.1
CAPN1-202ENST00000524773 CACTINQ8WUQ7 758 aaKnown RBP15.65■□□□□ 0.1
CAPN1-202ENST00000524773 ZSWIM6Q9HCJ5 1215 aa15.65■□□□□ 0.1
CAPN1-202ENST00000524773 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
CAPN1-202ENST00000524773 TNNT1P13805 278 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 VPS53Q5VIR6 699 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 SPATA32Q96LK8 384 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 USP6P35125 1406 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
CAPN1-202ENST00000524773 BEND3Q5T5X7 828 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
CAPN1-202ENST00000524773 DNAAF4Q8WXU2 420 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 IL17RAQ96F46 866 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 TRMT1Q9NXH9 659 aaKnown RBP15.64■□□□□ 0.09
CAPN1-202ENST00000524773 TAOK2Q9UL54 1235 aa15.64■□□□□ 0.09
CAPN1-202ENST00000524773 GLRX3O76003 335 aaKnown RBP15.63■□□□□ 0.09
CAPN1-202ENST00000524773 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 ZSCAN25Q6NSZ9 544 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-202ENST00000524773 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 C9orf78Q9NZ63 289 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-202ENST00000524773 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 NRKQ7Z2Y5 1582 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 CCDC171Q6TFL3 1326 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 TPD52L1Q16890 204 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-202ENST00000524773 PODXL2Q9NZ53 605 aa15.63■□□□□ 0.09
CAPN1-202ENST00000524773 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-202ENST00000524773 FLT4P35916 1363 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 AOX1Q06278 1338 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 GOLGA6L6A8MZA4 724 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 SLC27A2O14975 620 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 MPRIPQ6WCQ1 1025 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ANKRD7Q92527 254 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ECHDC1Q9NTX5 307 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ZNF165P49910 485 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 SLFNL1Q499Z3 407 aa15.62■□□□□ 0.09
CAPN1-202ENST00000524773 ZNF75DP51815 510 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 FILIP1Q7Z7B0 1213 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 LEO1Q8WVC0 666 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-202ENST00000524773 EAF2Q96CJ1 260 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-202ENST00000524773 CLIP2Q9UDT6 1046 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 HOXC9P31274 260 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 CCDC129Q6ZRS4 1044 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 USP16Q9Y5T5 823 aa15.61■□□□□ 0.09
CAPN1-202ENST00000524773 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
CAPN1-202ENST00000524773 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
CAPN1-202ENST00000524773 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
CAPN1-202ENST00000524773 ZBTB22O15209 634 aa15.6■□□□□ 0.09
CAPN1-202ENST00000524773 C11orf57Q6ZUT1 292 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-202ENST00000524773 FSD1Q9BTV5 496 aa15.6■□□□□ 0.09
CAPN1-202ENST00000524773 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
CAPN1-202ENST00000524773 TOB2Q14106 344 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-202ENST00000524773 ZNF771Q7L3S4 317 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-202ENST00000524773 CTIFO43310 598 aaKnown RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 RUFY2Q8WXA3 655 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 ST7Q9NRC1 585 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 MAP3K5Q99683 1374 aa15.59■□□□□ 0.09
CAPN1-202ENST00000524773 EIF4A1P60842 406 aaKnown RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 LRRC59Q96AG4 307 aaKnown RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 SH2B1Q9NRF2 756 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-202ENST00000524773 SASH1O94885 1247 aa15.58■□□□□ 0.09
CAPN1-202ENST00000524773 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.09
CAPN1-202ENST00000524773 KDRP35968 1356 aa15.58■□□□□ 0.09
CAPN1-202ENST00000524773 HSP90B1P14625 803 aaKnown RBP15.58■□□□□ 0.08
CAPN1-202ENST00000524773 KCNA6P17658 529 aa15.58■□□□□ 0.08
CAPN1-202ENST00000524773 ABTB2Q8N961 1025 aa15.58■□□□□ 0.08
CAPN1-202ENST00000524773 ZSCAN31Q96LW9 406 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-202ENST00000524773 BRF1Q92994 677 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 ADCY9O60503 1353 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 USP31Q70CQ4 1352 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms