RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 MYH3P11055 1940 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 CNTNAP1P78357 1384 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 POTEIP0CG38 1075 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 IARSP41252 1262 aaKnown RBP8.54□□□□□ -1.04
NUP98-213ENST00000524563 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
NUP98-213ENST00000524563 RIPK4P57078 832 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 CLEC4GQ6UXB4 293 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 RTKN2Q8IZC4 609 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 JDP2Q8WYK2 163 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 ABT1Q9ULW3 272 aaKnown RBP8.54□□□□□ -1.04
NUP98-213ENST00000524563 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 CASP8AP2Q9UKL3 1982 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
NUP98-213ENST00000524563 CCER2I3L3R5 266 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 MYL6BP14649 208 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 GPTP24298 496 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 ALDH1B1P30837 517 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 GRM1Q13255 1194 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
NUP98-213ENST00000524563 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 RIC1Q4ADV7 1423 aa8.53□□□□□ -1.04
NUP98-213ENST00000524563 LRRC37AA6NMS7 1700 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 APAF1O14727 1248 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 TCERG1O14776 1098 aaKnown RBP8.52□□□□□ -1.05
NUP98-213ENST00000524563 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
NUP98-213ENST00000524563 EPHX2P34913 555 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 TAF7Q15545 349 aaPredicted RBP8.52□□□□□ -1.05
NUP98-213ENST00000524563 OLFM4Q6UX06 510 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 NIM1KQ8IY84 436 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
NUP98-213ENST00000524563 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 MIS18AQ9NYP9 233 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
NUP98-213ENST00000524563 PCNTO95613 3336 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 POTECB2RU33 542 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
NUP98-213ENST00000524563 LMOD3Q0VAK6 560 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 HLFQ16534 295 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
NUP98-213ENST00000524563 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 RBM17Q96I25 401 aaKnown RBP8.51□□□□□ -1.05
NUP98-213ENST00000524563 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
NUP98-213ENST00000524563 COL4A5P29400 1685 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 PSME4Q14997 1843 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 RGL2O15211 777 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 FOXN1O15353 648 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
NUP98-213ENST00000524563 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
NUP98-213ENST00000524563 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 GPC2Q8N158 579 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 TSPYL4Q9UJ04 414 aa8.5□□□□□ -1.05
NUP98-213ENST00000524563 VEGFBP49765 207 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 PPP1R42Q7Z4L9 355 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 PSMD1Q99460 953 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 CACNA1FO60840 1977 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 UBN2Q6ZU65 1347 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 PASKQ96RG2 1323 aa8.49□□□□□ -1.05
NUP98-213ENST00000524563 ERVV-1B6SEH8 477 aa8.48□□□□□ -1.05
NUP98-213ENST00000524563 EIF2S2P20042 333 aaKnown RBP8.48□□□□□ -1.05
NUP98-213ENST00000524563 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
NUP98-213ENST00000524563 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
NUP98-213ENST00000524563 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
NUP98-213ENST00000524563 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
NUP98-213ENST00000524563 FZD9O00144 591 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 ECE1P42892 770 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 LBX1P52954 281 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 AOC3Q16853 763 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 GRIPAP1Q4V328 841 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 PARP10Q53GL7 1025 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 C7orf43Q8WVR3 580 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 ZNF408Q9H9D4 720 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
NUP98-213ENST00000524563 SCN9AQ15858 1988 aa8.46□□□□□ -1.05
NUP98-213ENST00000524563 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.06
NUP98-213ENST00000524563 CHL1O00533 1208 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 NTSR2O95665 410 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.06
NUP98-213ENST00000524563 AIMP1Q12904 312 aaKnown RBP8.46□□□□□ -1.06
NUP98-213ENST00000524563 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 KRT24Q2M2I5 525 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 CRY2Q49AN0 593 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 HSP90AB3PQ58FF7 597 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
NUP98-213ENST00000524563 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.06
NUP98-213ENST00000524563 CFAP44Q96MT7 982 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms