RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 L3MBTL3Q96JM7 780 aaPredicted RBP12.62□□□□□ -0.39
CAPN11-202ENST00000524554 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
CAPN11-202ENST00000524554 EIF2S2P20042 333 aaKnown RBP12.61□□□□□ -0.39
CAPN11-202ENST00000524554 HOXA10P31260 410 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-202ENST00000524554 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
CAPN11-202ENST00000524554 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
CAPN11-202ENST00000524554 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
CAPN11-202ENST00000524554 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-202ENST00000524554 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
CAPN11-202ENST00000524554 ZNF541Q9H0D2 1346 aa12.61□□□□□ -0.39
CAPN11-202ENST00000524554 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 FZD9O00144 591 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 ANXA1P04083 346 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
CAPN11-202ENST00000524554 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 ABCC12Q96J65 1359 aa12.6□□□□□ -0.39
CAPN11-202ENST00000524554 NTSR2O95665 410 aa12.59□□□□□ -0.39
CAPN11-202ENST00000524554 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
CAPN11-202ENST00000524554 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
CAPN11-202ENST00000524554 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
CAPN11-202ENST00000524554 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 PSMD1Q99460 953 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 IL16Q14005 1332 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 PCNTO95613 3336 aa12.58□□□□□ -0.4
CAPN11-202ENST00000524554 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
CAPN11-202ENST00000524554 ERBB4Q15303 1308 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 CHL1O00533 1208 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
CAPN11-202ENST00000524554 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 COPS6Q7L5N1 327 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
CAPN11-202ENST00000524554 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 RPGRQ92834 1020 aaKnown RBP12.57□□□□□ -0.4
CAPN11-202ENST00000524554 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
CAPN11-202ENST00000524554 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
CAPN11-202ENST00000524554 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
CAPN11-202ENST00000524554 EPHX2P34913 555 aa12.56□□□□□ -0.4
CAPN11-202ENST00000524554 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
CAPN11-202ENST00000524554 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
CAPN11-202ENST00000524554 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
CAPN11-202ENST00000524554 UTP14AQ9BVJ6 771 aaKnown RBP12.56□□□□□ -0.4
CAPN11-202ENST00000524554 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
CAPN11-202ENST00000524554 TNRC6CQ9HCJ0 1690 aaKnown RBP12.55□□□□□ -0.4
CAPN11-202ENST00000524554 HSPA1AP0DMV8 641 aaKnown RBP12.55□□□□□ -0.4
CAPN11-202ENST00000524554 HSPA1BP0DMV9 641 aaKnown RBP12.55□□□□□ -0.4
CAPN11-202ENST00000524554 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
CAPN11-202ENST00000524554 GPC2Q8N158 579 aa12.55□□□□□ -0.4
CAPN11-202ENST00000524554 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
CAPN11-202ENST00000524554 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
CAPN11-202ENST00000524554 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
CAPN11-202ENST00000524554 FER1L6Q2WGJ9 1857 aa12.54□□□□□ -0.4
CAPN11-202ENST00000524554 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
CAPN11-202ENST00000524554 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
CAPN11-202ENST00000524554 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
CAPN11-202ENST00000524554 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
CAPN11-202ENST00000524554 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
CAPN11-202ENST00000524554 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
CAPN11-202ENST00000524554 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
CAPN11-202ENST00000524554 MAP1SQ66K74 1059 aaPredicted RBP12.53□□□□□ -0.4
CAPN11-202ENST00000524554 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
CAPN11-202ENST00000524554 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN11-202ENST00000524554 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
CAPN11-202ENST00000524554 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
CAPN11-202ENST00000524554 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
CAPN11-202ENST00000524554 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.4
CAPN11-202ENST00000524554 EPS15P42566 896 aa12.52□□□□□ -0.4
CAPN11-202ENST00000524554 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.4
CAPN11-202ENST00000524554 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.4
CAPN11-202ENST00000524554 ZNF428Q96B54 188 aa12.52□□□□□ -0.4
CAPN11-202ENST00000524554 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.4
CAPN11-202ENST00000524554 TMEM88BA6NKF7 163 aa12.52□□□□□ -0.41
CAPN11-202ENST00000524554 BBOX1O75936 387 aa12.52□□□□□ -0.41
CAPN11-202ENST00000524554 SCNN1DP51172 638 aa12.52□□□□□ -0.41
CAPN11-202ENST00000524554 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
CAPN11-202ENST00000524554 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
CAPN11-202ENST00000524554 VEGFBP49765 207 aa12.51□□□□□ -0.41
CAPN11-202ENST00000524554 FMR1Q06787 632 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN11-202ENST00000524554 AOC3Q16853 763 aa12.51□□□□□ -0.41
CAPN11-202ENST00000524554 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms