RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-223ENST00000524033 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 SSH1Q8WYL5 1049 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 AK7Q96M32 723 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 C22orf23Q9BZE7 217 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 ZBTB40Q9NUA8 1239 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 ASAP1Q9ULH1 1129 aa9.76□□□□□ -0.85
SPIDR-223ENST00000524033 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 FAM208AQ9UK61 1670 aaKnown RBP9.75□□□□□ -0.85
SPIDR-223ENST00000524033 LOC102724428A0A0B4J2F2 783 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 ZMYND10O75800 440 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 U2AF1L5P0DN76 240 aaPredicted RBP9.75□□□□□ -0.85
SPIDR-223ENST00000524033 SIK1P57059 783 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 U2AF1Q01081 240 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPIDR-223ENST00000524033 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
SPIDR-223ENST00000524033 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 TUBGCP6Q96RT7 1819 aa9.75□□□□□ -0.85
SPIDR-223ENST00000524033 ERVV-2B6SEH9 535 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 SNPHO15079 494 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 MAP3K7O43318 606 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
SPIDR-223ENST00000524033 OSBPP22059 807 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 NUCB1Q02818 461 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 FTSJ3Q8IY81 847 aaKnown RBP9.74□□□□□ -0.85
SPIDR-223ENST00000524033 NLGN2Q8NFZ4 835 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 ATG3Q9NT62 314 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 ISY1Q9ULR0 285 aaKnown RBP9.74□□□□□ -0.85
SPIDR-223ENST00000524033 BTAF1O14981 1849 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 IGSF1Q8N6C5 1336 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
SPIDR-223ENST00000524033 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
SPIDR-223ENST00000524033 PHF14O94880 888 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 NUDT7P0C024 238 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
SPIDR-223ENST00000524033 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 SMIM5Q71RC9 77 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 TMEM57Q8N5G2 664 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
SPIDR-223ENST00000524033 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 EPAS1Q99814 870 aa9.73□□□□□ -0.85
SPIDR-223ENST00000524033 FCHSD2O94868 740 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 SSFA2P28290 1259 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 MFAP1P55081 439 aaKnown RBP9.72□□□□□ -0.85
SPIDR-223ENST00000524033 CABP4P57796 275 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 ITPK1Q13572 414 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
SPIDR-223ENST00000524033 AMIGO3Q86WK7 504 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 NOB1Q9ULX3 412 aaKnown RBP9.72□□□□□ -0.85
SPIDR-223ENST00000524033 CD2APQ9Y5K6 639 aa9.72□□□□□ -0.85
SPIDR-223ENST00000524033 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.85
SPIDR-223ENST00000524033 GOLGA6L3A6NEY3 463 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 GNPATO15228 680 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 GRIN3BO60391 1043 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 IL13P35225 146 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 AEBP1Q8IUX7 1158 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 KIF2CQ99661 725 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 ABCC4O15439 1325 aa9.71□□□□□ -0.86
SPIDR-223ENST00000524033 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 HSCBQ8IWL3 235 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 NFATC2IPQ8NCF5 419 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.867e-14■■■■□ 21.1
SPIDR-223ENST00000524033 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 PLEKHG2Q9H7P9 1386 aa9.7□□□□□ -0.86
SPIDR-223ENST00000524033 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 IPO8O15397 1037 aaKnown RBP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 TRAK2O60296 914 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 ZNF853P0CG23 659 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 YBX3P16989 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 CLCN1P35523 988 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 MRE11P49959 708 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 RAB3GAP1Q15042 981 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
SPIDR-223ENST00000524033 PNNQ9H307 717 aaKnown RBP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
SPIDR-223ENST00000524033 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 DOT1LQ8TEK3 1739 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
SPIDR-223ENST00000524033 HOXB3P14651 431 aaPredicted RBP9.68□□□□□ -0.86
SPIDR-223ENST00000524033 RIPK4P57078 832 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
SPIDR-223ENST00000524033 CHD1LQ86WJ1 897 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms