RNA–Protein interactions for RNA: ENST00000523903.5

NT5C3B-216, Transcript of 5'-nucleotidase, cytosolic IIIB, humanhuman

TSL 1 (best)

Gene NT5C3B, Length 1,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3B-216ENST00000523903 CT47B1P0C2W7 299 aaPredicted RBP28.37■■■□□ 2.13
NT5C3B-216ENST00000523903 SYNE4Q8N205 404 aa28.37■■■□□ 2.13
NT5C3B-216ENST00000523903 BRCA1P38398 1863 aaKnown RBP28.36■■■□□ 2.13
NT5C3B-216ENST00000523903 C2CD5Q86YS7 1000 aa28.36■■■□□ 2.13
NT5C3B-216ENST00000523903 YTHDC1Q96MU7 727 aaKnown RBP28.36■■■□□ 2.13
NT5C3B-216ENST00000523903 SMC4Q9NTJ3 1288 aa28.36■■■□□ 2.13
NT5C3B-216ENST00000523903 COL11A2P13942 1736 aaPredicted RBP28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 IBTKQ9P2D0 1353 aaPredicted RBP28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 PDE6BP35913 854 aa28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 ALDH1L2Q3SY69 923 aa28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 TRMT112Q9UI30 125 aaKnown RBP28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 TNRC6CQ9HCJ0 1690 aaKnown RBP28.35■■■□□ 2.13
NT5C3B-216ENST00000523903 H0YIN7 160 aa28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 IGKV5-2P06315 115 aa28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 TRIM28Q13263 835 aaKnown RBP28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 GPR162Q16538 588 aa28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 RTL5Q5HYW3 569 aaPredicted RBP28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 DNAAF4Q8WXU2 420 aa28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 YBX3P16989 372 aaKnown RBP eCLIP28.33■■■□□ 2.131e-6■■■□□ 15.3
NT5C3B-216ENST00000523903 RARSP54136 660 aaKnown RBP28.33■■■□□ 2.13
NT5C3B-216ENST00000523903 DLEC1Q9Y238 1755 aa28.32■■■□□ 2.12
NT5C3B-216ENST00000523903 NEXNQ0ZGT2 675 aa28.32■■■□□ 2.12
NT5C3B-216ENST00000523903 CWF19L2Q2TBE0 894 aaKnown RBP28.32■■■□□ 2.12
NT5C3B-216ENST00000523903 FAM89AQ96GI7 184 aa28.32■■■□□ 2.12
NT5C3B-216ENST00000523903 JARID2Q92833 1246 aaPredicted RBP28.31■■■□□ 2.12
NT5C3B-216ENST00000523903 HCLS1P14317 486 aaPredicted RBP28.3■■■□□ 2.12
NT5C3B-216ENST00000523903 CCDC191Q8NCU4 936 aa28.3■■■□□ 2.12
NT5C3B-216ENST00000523903 ZNF622Q969S3 477 aaKnown RBP eCLIP28.3■■■□□ 2.12
NT5C3B-216ENST00000523903 PIM2Q9P1W9 311 aa28.3■■■□□ 2.12
NT5C3B-216ENST00000523903 CACNA1SQ13698 1873 aa28.3■■■□□ 2.12
NT5C3B-216ENST00000523903 CWC25Q9NXE8 425 aaPredicted RBP28.29■■■□□ 2.12
NT5C3B-216ENST00000523903 BCS1LQ9Y276 419 aa28.29■■■□□ 2.12
NT5C3B-216ENST00000523903 SH3TC1Q8TE82 1336 aa28.29■■■□□ 2.12
NT5C3B-216ENST00000523903 DCAF8L1A6NGE4 600 aa28.28■■■□□ 2.12
NT5C3B-216ENST00000523903 C3orf67Q6ZVT6 689 aa28.28■■■□□ 2.12
NT5C3B-216ENST00000523903 UTRNP46939 3433 aa28.28■■■□□ 2.12
NT5C3B-216ENST00000523903 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
NT5C3B-216ENST00000523903 SRGNP10124 158 aa28.28■■■□□ 2.12
NT5C3B-216ENST00000523903 LAMB2P55268 1798 aa28.27■■■□□ 2.12
NT5C3B-216ENST00000523903 KLRG2A4D1S0 409 aaPredicted RBP28.27■■■□□ 2.12
NT5C3B-216ENST00000523903 SLC10A5Q5PT55 438 aa28.27■■■□□ 2.12
NT5C3B-216ENST00000523903 SLC4A10Q6U841 1118 aa28.27■■■□□ 2.12
NT5C3B-216ENST00000523903 DDX60Q8IY21 1712 aaKnown RBP28.27■■■□□ 2.12
NT5C3B-216ENST00000523903 RNF123Q5XPI4 1314 aa28.26■■■□□ 2.11
NT5C3B-216ENST00000523903 BCAR3O75815 825 aa28.26■■■□□ 2.11
NT5C3B-216ENST00000523903 NOB1Q9ULX3 412 aaKnown RBP28.26■■■□□ 2.11
NT5C3B-216ENST00000523903 PDZRN3Q9UPQ7 1066 aa28.26■■■□□ 2.11
NT5C3B-216ENST00000523903 PTPRCP08575 1304 aa28.25■■■□□ 2.11
NT5C3B-216ENST00000523903 ZBTB38Q8NAP3 1195 aaPredicted RBP28.25■■■□□ 2.11
NT5C3B-216ENST00000523903 DALRD3Q5D0E6 543 aaKnown RBP28.24■■■□□ 2.11
NT5C3B-216ENST00000523903 BEND3Q5T5X7 828 aa28.24■■■□□ 2.11
NT5C3B-216ENST00000523903 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
NT5C3B-216ENST00000523903 MASTLQ96GX5 879 aa28.24■■■□□ 2.11
NT5C3B-216ENST00000523903 NLRP3Q96P20 1036 aa28.24■■■□□ 2.11
NT5C3B-216ENST00000523903 TTLL6Q8N841 843 aa28.23■■■□□ 2.11
NT5C3B-216ENST00000523903 RIC1Q4ADV7 1423 aa28.23■■■□□ 2.11
NT5C3B-216ENST00000523903 IRS4O14654 1257 aaPredicted RBP28.23■■■□□ 2.11
NT5C3B-216ENST00000523903 PCCAP05165 728 aaPredicted RBP28.23■■■□□ 2.11
NT5C3B-216ENST00000523903 BRPF1P55201 1214 aaPredicted RBP28.23■■■□□ 2.11
NT5C3B-216ENST00000523903 SLX4Q8IY92 1834 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 ARFGEF1Q9Y6D6 1849 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 NPR1P16066 1061 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 GCKRQ14397 625 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 CRY2Q49AN0 593 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 STYK1Q6J9G0 422 aa28.22■■■□□ 2.11
NT5C3B-216ENST00000523903 ZNF219Q9P2Y4 722 aaPredicted RBP28.2■■■□□ 2.1
NT5C3B-216ENST00000523903 RPGRQ92834 1020 aaKnown RBP28.19■■■□□ 2.1
NT5C3B-216ENST00000523903 TAF1P21675 1872 aa28.19■■■□□ 2.1
NT5C3B-216ENST00000523903 UBE3BQ7Z3V4 1068 aa28.18■■■□□ 2.1
NT5C3B-216ENST00000523903 CNKSR1Q969H4 720 aa28.18■■■□□ 2.1
NT5C3B-216ENST00000523903 H7C1W4 665 aa28.18■■■□□ 2.1
NT5C3B-216ENST00000523903 FRAT1Q92837 279 aaPredicted RBP28.18■■■□□ 2.1
NT5C3B-216ENST00000523903 SRCIN1Q9C0H9 1055 aa28.18■■■□□ 2.1
NT5C3B-216ENST00000523903 GRIN3BO60391 1043 aa28.17■■■□□ 2.1
NT5C3B-216ENST00000523903 PRPF40BQ6NWY9 871 aaKnown RBP28.17■■■□□ 2.1
NT5C3B-216ENST00000523903 KIF16BQ96L93 1317 aa28.17■■■□□ 2.1
NT5C3B-216ENST00000523903 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
NT5C3B-216ENST00000523903 TNNQ9UQP3 1299 aa28.15■■■□□ 2.1
NT5C3B-216ENST00000523903 CDHR2Q9BYE9 1310 aa28.15■■■□□ 2.1
NT5C3B-216ENST00000523903 C21orf2O43822 256 aa28.14■■■□□ 2.1
NT5C3B-216ENST00000523903 ALDH1L1O75891 902 aa28.14■■■□□ 2.1
NT5C3B-216ENST00000523903 CASP7P55210 303 aa28.14■■■□□ 2.1
NT5C3B-216ENST00000523903 RBM17Q96I25 401 aaKnown RBP28.14■■■□□ 2.1
NT5C3B-216ENST00000523903 API5Q9BZZ5 524 aaKnown RBP28.14■■■□□ 2.1
NT5C3B-216ENST00000523903 MYH3P11055 1940 aa28.14■■■□□ 2.09
NT5C3B-216ENST00000523903 PDE8AO60658 829 aa28.13■■■□□ 2.09
NT5C3B-216ENST00000523903 ALDH1B1P30837 517 aa28.13■■■□□ 2.09
NT5C3B-216ENST00000523903 ARHGAP27Q6ZUM4 889 aa28.13■■■□□ 2.09
NT5C3B-216ENST00000523903 SF3B3Q15393 1217 aaKnown RBP28.13■■■□□ 2.09
NT5C3B-216ENST00000523903 CCDC85AQ96PX6 553 aaPredicted RBP28.13■■■□□ 2.09
NT5C3B-216ENST00000523903 CRAMP1Q96RY5 1269 aa28.12■■■□□ 2.09
NT5C3B-216ENST00000523903 C9orf78Q9NZ63 289 aaPredicted RBP28.12■■■□□ 2.09
NT5C3B-216ENST00000523903 CHD4Q14839 1912 aa28.11■■■□□ 2.09
NT5C3B-216ENST00000523903 ABCC4O15439 1325 aa28.11■■■□□ 2.09
NT5C3B-216ENST00000523903 OLFM4Q6UX06 510 aa28.11■■■□□ 2.09
NT5C3B-216ENST00000523903 SLC51AQ86UW1 340 aa28.11■■■□□ 2.09
NT5C3B-216ENST00000523903 ARHGAP45Q92619 1136 aa28.11■■■□□ 2.09
NT5C3B-216ENST00000523903 GRM8O00222 908 aa28.1■■■□□ 2.09
NT5C3B-216ENST00000523903 IPO8O15397 1037 aaKnown RBP28.1■■■□□ 2.09
NT5C3B-216ENST00000523903 TRIM27P14373 513 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms