RNA–Protein interactions for RNA: ENST00000523663.5

ITGB2-223, Transcript of integrin subunit beta 2, human

TSL 5

Gene ITGB2, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-223	ENST00000523663	CCDC191	Q8NCU4	936 aa		19.96	■□□□□ 0.79
ITGB2-223	ENST00000523663	RCAN3	Q9UKA8	241 aa		19.96	■□□□□ 0.79
ITGB2-223	ENST00000523663	IGKV5-2	P06315	115 aa		19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	CWF19L2	Q2TBE0	894 aa	Known RBP	19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	LINS1	Q8NG48	757 aa		19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	FRAT1	Q92837	279 aa	Predicted RBP	19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	SYT17	Q9BSW7	474 aa		19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	CWC25	Q9NXE8	425 aa	Predicted RBP	19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	TRMT112	Q9UI30	125 aa	Known RBP	19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	RNF123	Q5XPI4	1314 aa		19.95	■□□□□ 0.78
ITGB2-223	ENST00000523663	NEURL1B	A8MQ27	555 aa		19.94	■□□□□ 0.78
ITGB2-223	ENST00000523663	IPO8	O15397	1037 aa	Known RBP	19.94	■□□□□ 0.78
ITGB2-223	ENST00000523663	ERFE	Q4G0M1	354 aa		19.94	■□□□□ 0.78
ITGB2-223	ENST00000523663	API5	Q9BZZ5	524 aa	Known RBP	19.94	■□□□□ 0.78
ITGB2-223	ENST00000523663	KIAA1551	Q9HCM1	1747 aa		19.93	■□□□□ 0.78
ITGB2-223	ENST00000523663	BEND3	Q5T5X7	828 aa		19.93	■□□□□ 0.78
ITGB2-223	ENST00000523663	BRIP1	Q9BX63	1249 aa		19.93	■□□□□ 0.78
ITGB2-223	ENST00000523663	SH3TC1	Q8TE82	1336 aa		19.93	■□□□□ 0.78
ITGB2-223	ENST00000523663	ABCC12	Q96J65	1359 aa		19.93	■□□□□ 0.78
ITGB2-223	ENST00000523663	NLGN2	Q8NFZ4	835 aa		19.92	■□□□□ 0.78
ITGB2-223	ENST00000523663	ARHGAP45	Q92619	1136 aa		19.92	■□□□□ 0.78
ITGB2-223	ENST00000523663	FAM89A	Q96GI7	184 aa		19.92	■□□□□ 0.78
ITGB2-223	ENST00000523663	PXDNL	A1KZ92	1463 aa		19.92	■□□□□ 0.78
ITGB2-223	ENST00000523663	TNRC6C	Q9HCJ0	1690 aa	Known RBP	19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	DDX60	Q8IY21	1712 aa	Known RBP	19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	LAMB2	P55268	1798 aa		19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	PDE6B	P35913	854 aa		19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	TGFB2	P61812	414 aa		19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	RTL5	Q5HYW3	569 aa	Predicted RBP	19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	SYNE4	Q8N205	404 aa		19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	SRCIN1	Q9C0H9	1055 aa		19.91	■□□□□ 0.78
ITGB2-223	ENST00000523663	COL11A2	P13942	1736 aa	Predicted RBP	19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	DLEC1	Q9Y238	1755 aa		19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	GCKR	Q14397	625 aa		19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	ZKSCAN2	Q63HK3	967 aa		19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	ATF7IP	Q6VMQ6	1270 aa		19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663	MYH3	P11055	1940 aa		19.9	■□□□□ 0.78
ITGB2-223	ENST00000523663		A0A0G2JLW4	131 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	ALDH1L1	O75891	902 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	PCCA	P05165	728 aa	Predicted RBP	19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	TRIM27	P14373	513 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	DPEP1	P16444	411 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	BRCA1	P38398	1863 aa	Known RBP	19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	RIC1	Q4ADV7	1423 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663	C2CD5	Q86YS7	1000 aa		19.89	■□□□□ 0.77
ITGB2-223	ENST00000523663		H0YIN7	160 aa		19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	HCLS1	P14317	486 aa	Predicted RBP	19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	CHRNA5	P30532	468 aa		19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	SLC10A5	Q5PT55	438 aa		19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	JARID2	Q92833	1246 aa	Predicted RBP	19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	CACNA1S	Q13698	1873 aa		19.88	■□□□□ 0.77
ITGB2-223	ENST00000523663	IRS4	O14654	1257 aa	Predicted RBP	19.87	■□□□□ 0.77
ITGB2-223	ENST00000523663	CCT4	P50991	539 aa	Known RBP	19.87	■□□□□ 0.77
ITGB2-223	ENST00000523663	UBE3B	Q7Z3V4	1068 aa		19.87	■□□□□ 0.77
ITGB2-223	ENST00000523663	CLUAP1	Q96AJ1	413 aa		19.87	■□□□□ 0.77
ITGB2-223	ENST00000523663	PDZRN3	Q9UPQ7	1066 aa		19.87	■□□□□ 0.77
ITGB2-223	ENST00000523663	ABCC4	O15439	1325 aa		19.86	■□□□□ 0.77
ITGB2-223	ENST00000523663	HSP90B1	P14625	803 aa	Known RBP	19.86	■□□□□ 0.77
ITGB2-223	ENST00000523663	NLRP3	Q96P20	1036 aa		19.86	■□□□□ 0.77
ITGB2-223	ENST00000523663	C9orf78	Q9NZ63	289 aa	Predicted RBP	19.86	■□□□□ 0.77
ITGB2-223	ENST00000523663	TNN	Q9UQP3	1299 aa		19.86	■□□□□ 0.77
ITGB2-223	ENST00000523663	KLRG2	A4D1S0	409 aa	Predicted RBP	19.85	■□□□□ 0.77
ITGB2-223	ENST00000523663		H7C1W4	665 aa		19.85	■□□□□ 0.77
ITGB2-223	ENST00000523663	GRM8	O00222	908 aa		19.85	■□□□□ 0.77
ITGB2-223	ENST00000523663	C3orf67	Q6ZVT6	689 aa		19.85	■□□□□ 0.77
ITGB2-223	ENST00000523663	CDHR2	Q9BYE9	1310 aa		19.84	■□□□□ 0.77
ITGB2-223	ENST00000523663	SRGN	P10124	158 aa		19.84	■□□□□ 0.77
ITGB2-223	ENST00000523663	KCNA3	P22001	575 aa		19.84	■□□□□ 0.77
ITGB2-223	ENST00000523663	FTSJ3	Q8IY81	847 aa	Known RBP	19.84	■□□□□ 0.77
ITGB2-223	ENST00000523663	WWC3	Q9ULE0	1092 aa		19.84	■□□□□ 0.77
ITGB2-223	ENST00000523663	CRY2	Q49AN0	593 aa		19.83	■□□□□ 0.77
ITGB2-223	ENST00000523663	INTS3	Q68E01	1043 aa	Known RBP	19.83	■□□□□ 0.77
ITGB2-223	ENST00000523663	RPGR	Q92834	1020 aa	Known RBP	19.83	■□□□□ 0.77
ITGB2-223	ENST00000523663	ZNF622	Q969S3	477 aa	Known RBP eCLIP	19.83	■□□□□ 0.77
ITGB2-223	ENST00000523663	PIM2	Q9P1W9	311 aa		19.83	■□□□□ 0.77
ITGB2-223	ENST00000523663	GOLGB1	Q14789	3259 aa	Known RBP	19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	NPR1	P16066	1061 aa		19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	CASP7	P55210	303 aa		19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	DZIP1L	Q8IYY4	767 aa	Known RBP	19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	MASTL	Q96GX5	879 aa		19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	TAF1	P21675	1872 aa		19.82	■□□□□ 0.76
ITGB2-223	ENST00000523663	PLIN1	O60240	522 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	PDE8A	O60658	829 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	MS4A1	P11836	297 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	STYK1	Q6J9G0	422 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	PELP1	Q8IZL8	1130 aa	Known RBP	19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	SLX4	Q8IY92	1834 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	ARFGEF1	Q9Y6D6	1849 aa		19.81	■□□□□ 0.76
ITGB2-223	ENST00000523663	DALRD3	Q5D0E6	543 aa	Known RBP	19.8	■□□□□ 0.76
ITGB2-223	ENST00000523663	TMEM57	Q8N5G2	664 aa		19.8	■□□□□ 0.76
ITGB2-223	ENST00000523663	USP44	Q9H0E7	712 aa		19.8	■□□□□ 0.76
ITGB2-223	ENST00000523663	UTY	O14607	1347 aa		19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	NBPF7	P0C2Y1	421 aa	Predicted RBP	19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	RLBP1	P12271	317 aa		19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	HOXA10	P31260	410 aa	Predicted RBP	19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	SF3B3	Q15393	1217 aa	Known RBP	19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	TTLL6	Q8N841	843 aa		19.79	■□□□□ 0.76
ITGB2-223	ENST00000523663	PANK1	Q8TE04	598 aa		19.79	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms