RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 CCDC82Q8N4S0 544 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 RMND1Q9NWS8 449 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 CAPN2P17655 700 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 HNRNPMP52272 730 aaKnown RBP eCLIP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 B4GALNT4Q76KP1 1039 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 PCK1P35558 622 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 NEDD9Q14511 834 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 TSNAXIP1Q2TAA8 658 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC89Q8N998 374 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 SSRP1Q08945 709 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 TRPC3Q13507 836 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 CEP85LQ5SZL2 805 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 INTS8Q75QN2 995 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 RBM28Q9NW13 759 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 KRT13P13646 458 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 SRRTQ9BXP5 876 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
EXTL3-214ENST00000523271 TMX1Q9H3N1 280 aa14.15□□□□□ -0.14
EXTL3-214ENST00000523271 ERCC5P28715 1186 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 GNG11P61952 73 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 ARFGAP2Q8N6H7 521 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 TUBB4AP04350 444 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 BRD4O60885 1362 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CTAGE15A4D2H0 777 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CTAGE8P0CG41 777 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 LIG1P18858 919 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 GEN1Q17RS7 908 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 SLF2Q8IX21 1173 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CTAGE4Q8IX94 777 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 POLR3DP05423 398 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 GABPB2Q8TAK5 448 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 TBC1D31Q96DN5 1066 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 BICD1Q96G01 975 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 ZMAT2Q96NC0 199 aaKnown RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CEP126Q9P2H0 1117 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-214ENST00000523271 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 MSANTD4Q8NCY6 345 aa14.14□□□□□ -0.15
EXTL3-214ENST00000523271 SUPT6HQ7KZ85 1726 aaKnown RBP14.13□□□□□ -0.15
EXTL3-214ENST00000523271 SLC12A7Q9Y666 1083 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 HDGFL1Q5TGJ6 251 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 VCX3AQ9NNX9 186 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 MCM6Q14566 821 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 FYB2Q5VWT5 728 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 FAM169AQ9Y6X4 670 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
EXTL3-214ENST00000523271 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 EXOC1Q9NV70 894 aa14.13□□□□□ -0.15
EXTL3-214ENST00000523271 MTRF1LQ9UGC7 380 aaKnown RBP14.13□□□□□ -0.15
EXTL3-214ENST00000523271 TUBBP07437 444 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 RNF41Q9H4P4 317 aaPredicted RBP14.12□□□□□ -0.15
EXTL3-214ENST00000523271 MTUS1Q9ULD2 1270 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 GOLGA8AA7E2F4 631 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 GOLGA8BA8MQT2 603 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 ARHGAP24Q8N264 748 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 CAVIN4Q5BKX8 364 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 NAPBQ9H115 298 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 FLIIQ13045 1269 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 CUL4BQ13620 913 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 AKR1B10O60218 316 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 CABP4P57796 275 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 NBPF11Q86T75 865 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 FMNL3Q8IVF7 1028 aa14.12□□□□□ -0.15
EXTL3-214ENST00000523271 IDH1O75874 414 aaKnown RBP14.11□□□□□ -0.15
EXTL3-214ENST00000523271 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
EXTL3-214ENST00000523271 GOLGA1Q92805 767 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 GIPC1O14908 333 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 SDCCAG8Q86SQ7 713 aaPredicted RBP14.11□□□□□ -0.15
EXTL3-214ENST00000523271 A6NNZ2 444 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 TBCAO75347 108 aaKnown RBP14.11□□□□□ -0.15
EXTL3-214ENST00000523271 TUBB8Q3ZCM7 444 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 IMPG2Q9BZV3 1241 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 BUB1BO60566 1050 aaPredicted RBP14.11□□□□□ -0.15
EXTL3-214ENST00000523271 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 RPGRIP1LQ68CZ1 1315 aa14.11□□□□□ -0.15
EXTL3-214ENST00000523271 SOGA1O94964 1423 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 CA8P35219 290 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 NLRP5P59047 1200 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 SAMM50Q9Y512 469 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 CCDC117Q8IWD4 279 aaPredicted RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 GPR161Q8N6U8 529 aaKnown RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 ADCY5O95622 1261 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 ATP6V1E1P36543 226 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 ERMNQ8TAM6 284 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 MAK16Q9BXY0 300 aaKnown RBP14.1□□□□□ -0.15
EXTL3-214ENST00000523271 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
EXTL3-214ENST00000523271 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms