RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 DUSP9Q99956 384 aaKnown RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 PICK1Q9NRD5 415 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 A0A1B0GUA9 196 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 UNCXA6NJT0 531 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 ERLIN2O94905 339 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 RLBP1P12271 317 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 KCNA2P16389 499 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 VCAM1P19320 739 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
HMGB4-204ENST00000522796 CEP135Q66GS9 1140 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 TMCO3Q6UWJ1 677 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 NEK9Q8TD19 979 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 DDX11Q96FC9 970 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 JPH2Q9BR39 696 aaPredicted RBP9.62□□□□□ -0.87
HMGB4-204ENST00000522796 ADAM21Q9UKJ8 722 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 CFAP69A5D8W1 941 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 SLC27A2O14975 620 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 CBFA2T2O43439 604 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 VDRP11473 427 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 LMNB1P20700 586 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 CWC27Q6UX04 472 aaKnown RBP9.62□□□□□ -0.87
HMGB4-204ENST00000522796 PMM1Q92871 262 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 ITM2BQ9Y287 266 aa9.62□□□□□ -0.87
HMGB4-204ENST00000522796 PYGLP06737 847 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 GCKP35557 465 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 PRPF4BQ13523 1007 aaKnown RBP9.61□□□□□ -0.87
HMGB4-204ENST00000522796 PREPLQ4J6C6 727 aaPredicted RBP9.61□□□□□ -0.87
HMGB4-204ENST00000522796 AKNAD1Q5T1N1 836 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 KAT2BQ92831 832 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 UNC45AQ9H3U1 944 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 ROCK1Q13464 1354 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 SHROOM2Q13796 1616 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 ELP1O95163 1332 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 H7C1W4 665 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
HMGB4-204ENST00000522796 ZNF24P17028 368 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 PARD3BQ8TEW8 1205 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 TCP11Q8WWU5 503 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
HMGB4-204ENST00000522796 SEZ6LQ9BYH1 1024 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 JADE2Q9NQC1 790 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 RABL2AQ9UBK7 228 aaPredicted RBP9.61□□□□□ -0.87
HMGB4-204ENST00000522796 COMMD10Q9Y6G5 202 aa9.61□□□□□ -0.87
HMGB4-204ENST00000522796 TPPPO94811 219 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 STIP1P31948 543 aaKnown RBP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 SMC1AQ14683 1233 aaKnown RBP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 C3orf20Q8ND61 904 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 SPOCK3Q9BQ16 436 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 HOMER3Q9NSC5 361 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 POLA1P09884 1462 aaPredicted RBP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 HMMRO75330 724 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 ANKRD13BQ86YJ7 626 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 UHMK1Q8TAS1 419 aaKnown RBP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 MRFAP1L1Q96HT8 127 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGB4-204ENST00000522796 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
HMGB4-204ENST00000522796 TPP2P29144 1249 aaPredicted RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SOGA3Q5TF21 947 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SPATA21Q7Z572 469 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 TBC1D5Q92609 795 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 UTP14AQ9BVJ6 771 aaKnown RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 TRIM7Q9C029 511 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 KLHL42Q9P2K6 505 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 ODF2LQ9ULJ1 636 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 CCDC171Q6TFL3 1326 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 RTN3O95197 1032 aaPredicted RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 PYGBP11216 843 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SESN3P58005 492 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SNX1Q13596 522 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 FILIP1LQ4L180 1135 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 ACBD5Q5T8D3 534 aaPredicted RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
HMGB4-204ENST00000522796 SYNE3Q6ZMZ3 975 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 VTI1AQ96AJ9 217 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 IFT57Q9NWB7 429 aa9.59□□□□□ -0.87
HMGB4-204ENST00000522796 CCDC18Q5T9S5 1454 aa9.59□□□□□ -0.88
HMGB4-204ENST00000522796 CHUKO15111 745 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
HMGB4-204ENST00000522796 KIAA1328Q86T90 577 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 NACA2Q9H009 215 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 F8VZ95 297 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 GJA8P48165 433 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 PPP4CP60510 307 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 TPD52L1Q16890 204 aaPredicted RBP9.58□□□□□ -0.88
HMGB4-204ENST00000522796 WLSQ5T9L3 541 aa9.58□□□□□ -0.88
HMGB4-204ENST00000522796 SFMBT2Q5VUG0 894 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms