RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ADCY9O60503 1353 aa23.02■■□□□ 1.28
CLK4-211ENST00000522556 VAMP4O75379 141 aa23.02■■□□□ 1.28
CLK4-211ENST00000522556 RASSF7Q02833 373 aa23.02■■□□□ 1.28
CLK4-211ENST00000522556 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
CLK4-211ENST00000522556 RIC1Q4ADV7 1423 aa23.01■■□□□ 1.27
CLK4-211ENST00000522556 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
CLK4-211ENST00000522556 ZNF784Q8NCA9 323 aaPredicted RBP23.01■■□□□ 1.27
CLK4-211ENST00000522556 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
CLK4-211ENST00000522556 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
CLK4-211ENST00000522556 FER1L6Q2WGJ9 1857 aa23■■□□□ 1.27
CLK4-211ENST00000522556 PRELPP51888 382 aa23■■□□□ 1.27
CLK4-211ENST00000522556 HSP90AB3PQ58FF7 597 aa23■■□□□ 1.27
CLK4-211ENST00000522556 STYK1Q6J9G0 422 aa23■■□□□ 1.27
CLK4-211ENST00000522556 PRPF40BQ6NWY9 871 aaKnown RBP23■■□□□ 1.27
CLK4-211ENST00000522556 MASTLQ96GX5 879 aa23■■□□□ 1.27
CLK4-211ENST00000522556 UTP14AQ9BVJ6 771 aaKnown RBP23■■□□□ 1.27
CLK4-211ENST00000522556 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
CLK4-211ENST00000522556 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
CLK4-211ENST00000522556 C21orf2O43822 256 aa22.99■■□□□ 1.27
CLK4-211ENST00000522556 OLFM4Q6UX06 510 aa22.99■■□□□ 1.27
CLK4-211ENST00000522556 PPP1R42Q7Z4L9 355 aa22.99■■□□□ 1.27
CLK4-211ENST00000522556 RIC3Q7Z5B4 369 aa22.99■■□□□ 1.27
CLK4-211ENST00000522556 TAF1P21675 1872 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 COL4A1P02462 1669 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 CRY2Q49AN0 593 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 MYD88Q99836 296 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 STK31Q9BXU1 1019 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 PDZRN3Q9UPQ7 1066 aa22.98■■□□□ 1.27
CLK4-211ENST00000522556 NFKBIEO00221 500 aa22.97■■□□□ 1.27
CLK4-211ENST00000522556 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
CLK4-211ENST00000522556 HCLS1P14317 486 aaPredicted RBP22.97■■□□□ 1.27
CLK4-211ENST00000522556 NPR1P16066 1061 aa22.97■■□□□ 1.27
CLK4-211ENST00000522556 TRMT112Q9UI30 125 aaKnown RBP22.97■■□□□ 1.27
CLK4-211ENST00000522556 MAP3K2Q9Y2U5 619 aa22.97■■□□□ 1.27
CLK4-211ENST00000522556 CACNA1FO60840 1977 aa22.97■■□□□ 1.27
CLK4-211ENST00000522556 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
CLK4-211ENST00000522556 SLFN5Q08AF3 891 aa22.95■■□□□ 1.26
CLK4-211ENST00000522556 TIAM2Q8IVF5 1701 aa22.95■■□□□ 1.26
CLK4-211ENST00000522556 CNKSR1Q969H4 720 aa22.95■■□□□ 1.26
CLK4-211ENST00000522556 SH3TC1Q8TE82 1336 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 PI4KAP2A4QPH2 592 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 C9orf131Q5VYM1 1079 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 PI4KAP1Q8N8J0 262 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 C7orf43Q8WVR3 580 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 JARID2Q92833 1246 aaPredicted RBP22.94■■□□□ 1.26
CLK4-211ENST00000522556 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
CLK4-211ENST00000522556 FLIIQ13045 1269 aa22.93■■□□□ 1.26
CLK4-211ENST00000522556 SLC10A5Q5PT55 438 aa22.93■■□□□ 1.26
CLK4-211ENST00000522556 METTL22Q9BUU2 404 aaPredicted RBP22.93■■□□□ 1.26
CLK4-211ENST00000522556 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
CLK4-211ENST00000522556 KSR2Q6VAB6 950 aa22.92■■□□□ 1.26
CLK4-211ENST00000522556 ZNF526Q8TF50 670 aaPredicted RBP22.92■■□□□ 1.26
CLK4-211ENST00000522556 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
CLK4-211ENST00000522556 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
CLK4-211ENST00000522556 E9PSI1 815 aa22.91■■□□□ 1.26
CLK4-211ENST00000522556 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
CLK4-211ENST00000522556 RPGRQ92834 1020 aaKnown RBP22.91■■□□□ 1.26
CLK4-211ENST00000522556 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
CLK4-211ENST00000522556 HOXA10P31260 410 aaPredicted RBP22.9■■□□□ 1.26
CLK4-211ENST00000522556 TRIM28Q13263 835 aaKnown RBP22.9■■□□□ 1.26
CLK4-211ENST00000522556 CWF19L2Q2TBE0 894 aaKnown RBP22.9■■□□□ 1.26
CLK4-211ENST00000522556 FKBP5Q13451 457 aaPredicted RBP22.89■■□□□ 1.25
CLK4-211ENST00000522556 NLRP3Q96P20 1036 aa22.89■■□□□ 1.25
CLK4-211ENST00000522556 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.25
CLK4-211ENST00000522556 DICER1Q9UPY3 1922 aaKnown RBP22.88■■□□□ 1.25
CLK4-211ENST00000522556 ABCC4O15439 1325 aa22.88■■□□□ 1.25
CLK4-211ENST00000522556 F6X3S4 739 aa22.88■■□□□ 1.25
CLK4-211ENST00000522556 TRMT2AQ8IZ69 625 aaKnown RBP22.88■■□□□ 1.25
CLK4-211ENST00000522556 IRS4O14654 1257 aaPredicted RBP22.86■■□□□ 1.25
CLK4-211ENST00000522556 ZBTB38Q8NAP3 1195 aaPredicted RBP22.86■■□□□ 1.25
CLK4-211ENST00000522556 CCDC191Q8NCU4 936 aa22.86■■□□□ 1.25
CLK4-211ENST00000522556 CWC25Q9NXE8 425 aaPredicted RBP22.86■■□□□ 1.25
CLK4-211ENST00000522556 NEURL1BA8MQ27 555 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 ALDH1B1P30837 517 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 CCDC93Q567U6 631 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 RBM17Q96I25 401 aaKnown RBP22.85■■□□□ 1.25
CLK4-211ENST00000522556 CRAMP1Q96RY5 1269 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 TAOK3Q9H2K8 898 aa22.85■■□□□ 1.25
CLK4-211ENST00000522556 PPEF1O14829 653 aaPredicted RBP22.84■■□□□ 1.25
CLK4-211ENST00000522556 LMNB1P20700 586 aa22.84■■□□□ 1.25
CLK4-211ENST00000522556 DNAAF4Q8WXU2 420 aa22.84■■□□□ 1.25
CLK4-211ENST00000522556 COL4A5P29400 1685 aa22.84■■□□□ 1.25
CLK4-211ENST00000522556 LRRC37AA6NMS7 1700 aa22.83■■□□□ 1.25
CLK4-211ENST00000522556 MYH3P11055 1940 aa22.83■■□□□ 1.25
CLK4-211ENST00000522556 PCCAP05165 728 aaPredicted RBP22.83■■□□□ 1.25
CLK4-211ENST00000522556 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
CLK4-211ENST00000522556 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
CLK4-211ENST00000522556 LTBP3Q9NS15 1303 aa22.82■■□□□ 1.24
CLK4-211ENST00000522556 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
CLK4-211ENST00000522556 CCDC85AQ96PX6 553 aaPredicted RBP22.81■■□□□ 1.24
CLK4-211ENST00000522556 ZNF277Q9NRM2 450 aaPredicted RBP22.81■■□□□ 1.24
CLK4-211ENST00000522556 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
CLK4-211ENST00000522556 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
CLK4-211ENST00000522556 SF3B3Q15393 1217 aaKnown RBP22.8■■□□□ 1.24
CLK4-211ENST00000522556 SOGA3Q5TF21 947 aa22.8■■□□□ 1.24
CLK4-211ENST00000522556 CELF1Q92879 486 aaKnown RBP22.8■■□□□ 1.24
CLK4-211ENST00000522556 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
CLK4-211ENST00000522556 FKBP4Q02790 459 aaKnown RBP eCLIP22.79■■□□□ 1.24
CLK4-211ENST00000522556 GCKRQ14397 625 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms