RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
CNOT8-220ENST00000522139 BTLAQ7Z6A9 289 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 NPAS3Q8IXF0 933 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 GAS2L1Q99501 681 aaPredicted RBP8.51□□□□□ -1.05
CNOT8-220ENST00000522139 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
CNOT8-220ENST00000522139 DYRK1BQ9Y463 629 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 F11P03951 625 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 PCSK2P16519 638 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 INPP5BP32019 993 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 C8orf34Q49A92 452 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 TREML4Q6UXN2 200 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 NIF3L1Q9GZT8 377 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
CNOT8-220ENST00000522139 A6NHS1 94 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 WFS1O76024 890 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 MAPK8P45983 427 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 EHHADHQ08426 723 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 CRISPLD1Q9H336 500 aa8.49□□□□□ -1.05
CNOT8-220ENST00000522139 KIAA1522Q9P206 1035 aaPredicted RBP8.49□□□□□ -1.05
CNOT8-220ENST00000522139 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
CNOT8-220ENST00000522139 ARSDP51689 593 aa8.48□□□□□ -1.05
CNOT8-220ENST00000522139 NFX1Q12986 1120 aaKnown RBP8.48□□□□□ -1.05
CNOT8-220ENST00000522139 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
CNOT8-220ENST00000522139 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
CNOT8-220ENST00000522139 MRRFQ96E11 262 aaKnown RBP8.48□□□□□ -1.05
CNOT8-220ENST00000522139 CEP63Q96MT8 703 aa8.48□□□□□ -1.05
CNOT8-220ENST00000522139 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
CNOT8-220ENST00000522139 TYRO3Q06418 890 aa8.47□□□□□ -1.05
CNOT8-220ENST00000522139 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
CNOT8-220ENST00000522139 IGSF5Q9NSI5 407 aa8.47□□□□□ -1.05
CNOT8-220ENST00000522139 RPLP1P05386 114 aaKnown RBP8.46□□□□□ -1.06
CNOT8-220ENST00000522139 VAMP1P23763 118 aa8.46□□□□□ -1.06
CNOT8-220ENST00000522139 PTSQ03393 145 aa8.46□□□□□ -1.06
CNOT8-220ENST00000522139 RIPOR1Q6ZS17 1223 aa8.46□□□□□ -1.06
CNOT8-220ENST00000522139 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
CNOT8-220ENST00000522139 H3BM21 787 aa8.45□□□□□ -1.06
CNOT8-220ENST00000522139 LDHBP07195 334 aaKnown RBP8.45□□□□□ -1.06
CNOT8-220ENST00000522139 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
CNOT8-220ENST00000522139 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
CNOT8-220ENST00000522139 NLRP8Q86W28 1048 aa8.45□□□□□ -1.06
CNOT8-220ENST00000522139 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
CNOT8-220ENST00000522139 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
CNOT8-220ENST00000522139 UBAP1LF5GYI3 381 aa8.44□□□□□ -1.06
CNOT8-220ENST00000522139 ORC1Q13415 861 aa8.44□□□□□ -1.06
CNOT8-220ENST00000522139 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
CNOT8-220ENST00000522139 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
CNOT8-220ENST00000522139 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
CNOT8-220ENST00000522139 ZCCHC2Q9C0B9 1178 aaKnown RBP8.44□□□□□ -1.06
CNOT8-220ENST00000522139 PNMA6FA0A0J9YX94 578 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 SLC35F4A4IF30 521 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 THBS1P07996 1170 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 EPB42P16452 691 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 IRF7Q92985 503 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 BRD7Q9NPI1 651 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
CNOT8-220ENST00000522139 FNDC3AQ9Y2H6 1198 aaKnown RBP8.43□□□□□ -1.06
CNOT8-220ENST00000522139 VEGFBP49765 207 aa8.42□□□□□ -1.06
CNOT8-220ENST00000522139 LBRQ14739 615 aaKnown RBP8.42□□□□□ -1.06
CNOT8-220ENST00000522139 ENOX2Q16206 610 aaKnown RBP8.42□□□□□ -1.06
CNOT8-220ENST00000522139 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
CNOT8-220ENST00000522139 CCDC155Q8N6L0 562 aa8.42□□□□□ -1.06
CNOT8-220ENST00000522139 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
CNOT8-220ENST00000522139 DUSP9Q99956 384 aaKnown RBP8.42□□□□□ -1.06
CNOT8-220ENST00000522139 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
CNOT8-220ENST00000522139 FOXD3Q9UJU5 478 aaPredicted RBP8.42□□□□□ -1.06
CNOT8-220ENST00000522139 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
CNOT8-220ENST00000522139 ATXN7O15265 892 aaPredicted RBP8.41□□□□□ -1.06
CNOT8-220ENST00000522139 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 XYLBO75191 536 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 PRPF40AO75400 957 aaKnown RBP8.41□□□□□ -1.06
CNOT8-220ENST00000522139 FGD1P98174 961 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 ATP2B2Q01814 1243 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 DBN1Q16643 649 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 NUCKS1Q9H1E3 243 aaKnown RBP8.41□□□□□ -1.06
CNOT8-220ENST00000522139 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
CNOT8-220ENST00000522139 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 TNFRSF21O75509 655 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 NEFLP07196 543 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
CNOT8-220ENST00000522139 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
CNOT8-220ENST00000522139 FAM161BQ96MY7 647 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 ELP3Q9H9T3 547 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 PCDHGC4Q9Y5F7 938 aa8.4□□□□□ -1.06
CNOT8-220ENST00000522139 KHNYNO15037 678 aaKnown RBP8.39□□□□□ -1.07
CNOT8-220ENST00000522139 EGFRP00533 1210 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 KCNQ4P56696 695 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
CNOT8-220ENST00000522139 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
CNOT8-220ENST00000522139 ALG1LQ6GMV1 187 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
CNOT8-220ENST00000522139 FIGNL1Q6PIW4 674 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms