RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 APLP1P51693 650 aa23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 FSTL1Q12841 308 aa23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 MBIPQ9NS73 344 aa23.58■■□□□ 1.37
TOP1MT-215ENST00000522043 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
TOP1MT-215ENST00000522043 DNAJC5GQ8N7S2 189 aa23.56■■□□□ 1.36
TOP1MT-215ENST00000522043 ZNF277Q9NRM2 450 aaPredicted RBP23.56■■□□□ 1.36
TOP1MT-215ENST00000522043 COL4A5P29400 1685 aa23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 DDNO94850 711 aaPredicted RBP23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 HOXB7P09629 217 aa23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 HTRA3P83110 453 aa23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 HDGFL1Q5TGJ6 251 aa23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
TOP1MT-215ENST00000522043 SLC10A5Q5PT55 438 aa23.54■■□□□ 1.36
TOP1MT-215ENST00000522043 DPY19L2Q6NUT2 758 aa23.54■■□□□ 1.36
TOP1MT-215ENST00000522043 NLRP10Q86W26 655 aa23.54■■□□□ 1.36
TOP1MT-215ENST00000522043 SYNE4Q8N205 404 aa23.54■■□□□ 1.36
TOP1MT-215ENST00000522043 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
TOP1MT-215ENST00000522043 TCIRG1Q13488 830 aa23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 RTKN2Q8IZC4 609 aa23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 SMC1BQ8NDV3 1235 aa23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 RPGRQ92834 1020 aaKnown RBP23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
TOP1MT-215ENST00000522043 TAF1P21675 1872 aa23.52■■□□□ 1.36
TOP1MT-215ENST00000522043 ZNF541Q9H0D2 1346 aa23.52■■□□□ 1.36
TOP1MT-215ENST00000522043 HSP90AB3PQ58FF7 597 aa23.51■■□□□ 1.35
TOP1MT-215ENST00000522043 CRAMP1Q96RY5 1269 aa23.51■■□□□ 1.35
TOP1MT-215ENST00000522043 IFT57Q9NWB7 429 aa23.51■■□□□ 1.35
TOP1MT-215ENST00000522043 SCN4AP35499 1836 aa23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 ZNF428Q96B54 188 aa23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 RBM17Q96I25 401 aaKnown RBP23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 PSMD1Q99460 953 aa23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
TOP1MT-215ENST00000522043 POTEIP0CG38 1075 aa23.49■■□□□ 1.35
TOP1MT-215ENST00000522043 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
TOP1MT-215ENST00000522043 NLRP3Q96P20 1036 aa23.49■■□□□ 1.35
TOP1MT-215ENST00000522043 PPEF1O14829 653 aaPredicted RBP23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 HCLS1P14317 486 aaPredicted RBP23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 L3MBTL3Q96JM7 780 aaPredicted RBP23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 ABCC4O15439 1325 aa23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 RNF123Q5XPI4 1314 aa23.48■■□□□ 1.35
TOP1MT-215ENST00000522043 FZD9O00144 591 aa23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 GNAI1P63096 354 aa23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 CC2D2BQ6DHV5 1058 aa23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 ISCA1Q9BUE6 129 aa23.47■■□□□ 1.35
TOP1MT-215ENST00000522043 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
TOP1MT-215ENST00000522043 COL4A1P02462 1669 aa23.46■■□□□ 1.35
TOP1MT-215ENST00000522043 C8orf58Q8NAV2 365 aa23.46■■□□□ 1.35
TOP1MT-215ENST00000522043 TRMT112Q9UI30 125 aaKnown RBP23.46■■□□□ 1.35
TOP1MT-215ENST00000522043 SH3TC1Q8TE82 1336 aa23.45■■□□□ 1.34
TOP1MT-215ENST00000522043 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
TOP1MT-215ENST00000522043 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
TOP1MT-215ENST00000522043 ATP5J2-PTCD1G3V325 749 aa23.44■■□□□ 1.34
TOP1MT-215ENST00000522043 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
TOP1MT-215ENST00000522043 LTBP1Q14766 1721 aa23.43■■□□□ 1.34
TOP1MT-215ENST00000522043 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
TOP1MT-215ENST00000522043 CALD1Q05682 793 aaKnown RBP23.43■■□□□ 1.34
TOP1MT-215ENST00000522043 TSPYL6Q8N831 410 aa23.43■■□□□ 1.34
TOP1MT-215ENST00000522043 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
TOP1MT-215ENST00000522043 TAF1DQ9H5J8 278 aaPredicted RBP23.42■■□□□ 1.34
TOP1MT-215ENST00000522043 LRRC37AA6NMS7 1700 aa23.42■■□□□ 1.34
TOP1MT-215ENST00000522043 KLRG1Q96E93 195 aa23.41■■□□□ 1.34
TOP1MT-215ENST00000522043 GRIPAP1Q4V328 841 aa23.4■■□□□ 1.34
TOP1MT-215ENST00000522043 CHADLQ6NUI6 762 aa23.4■■□□□ 1.34
TOP1MT-215ENST00000522043 TSR2Q969E8 191 aaKnown RBP23.4■■□□□ 1.34
TOP1MT-215ENST00000522043 FAM89AQ96GI7 184 aa23.4■■□□□ 1.34
TOP1MT-215ENST00000522043 DUOX1Q9NRD9 1551 aa23.4■■□□□ 1.34
TOP1MT-215ENST00000522043 IQCA1LA6NCM1 817 aa23.39■■□□□ 1.33
TOP1MT-215ENST00000522043 CCDC27Q2M243 656 aa23.39■■□□□ 1.33
TOP1MT-215ENST00000522043 TRIM28Q13263 835 aaKnown RBP23.38■■□□□ 1.33
TOP1MT-215ENST00000522043 WWC1Q8IX03 1113 aa23.38■■□□□ 1.33
TOP1MT-215ENST00000522043 GPC2Q8N158 579 aa23.38■■□□□ 1.33
TOP1MT-215ENST00000522043 BBOX1O75936 387 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 GRAPQ13588 217 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 LARGE2Q8N3Y3 721 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 JMYQ8N9B5 988 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 GRAPLQ8TC17 118 aaPredicted RBP23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 JDP2Q8WYK2 163 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 RTFDC1Q9BY42 306 aaPredicted RBP23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
TOP1MT-215ENST00000522043 AOC3Q16853 763 aa23.36■■□□□ 1.33
TOP1MT-215ENST00000522043 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
TOP1MT-215ENST00000522043 DDX46Q7L014 1031 aaKnown RBP23.36■■□□□ 1.33
TOP1MT-215ENST00000522043 HACL1Q9UJ83 578 aa23.36■■□□□ 1.33
TOP1MT-215ENST00000522043 EPHX2P34913 555 aa23.35■■□□□ 1.33
TOP1MT-215ENST00000522043 SF3B3Q15393 1217 aaKnown RBP23.35■■□□□ 1.33
TOP1MT-215ENST00000522043 RIC3Q7Z5B4 369 aa23.35■■□□□ 1.33
TOP1MT-215ENST00000522043 LDHDQ86WU2 507 aa23.35■■□□□ 1.33
TOP1MT-215ENST00000522043 PPIP5K2O43314 1243 aa23.34■■□□□ 1.33
TOP1MT-215ENST00000522043 ANP32CO43423 234 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms