RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 FOXO3O43524 673 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 MAP4K4O95819 1239 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 ELP1O95163 1332 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 CDC25BP30305 580 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 CCT4P50991 539 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 G2E3Q7L622 706 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 SGSM2O43147 1006 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 FHOD1Q9Y613 1164 aa11.32□□□□□ -0.6
CTNNA1-230ENST00000521724 PNMA6EA0A0J9YXQ4 647 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 CHL1O00533 1208 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 H2AFXP16104 143 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 ERBB3P21860 1342 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 KIF2AO00139 706 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 PNMA6AP0CW24 399 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 ZSCAN31Q96LW9 406 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 SCAND2PQ9GZW5 306 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 CLSTN2Q9H4D0 955 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 DLC1Q96QB1 1528 aa11.31□□□□□ -0.6
CTNNA1-230ENST00000521724 CCDC69A6NI79 296 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 CAVIN2O95810 425 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 CLCN6P51797 869 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 BICD2Q8TD16 824 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
CTNNA1-230ENST00000521724 NR1I2O75469 434 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 TPM4P67936 248 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 NRXN3Q9Y4C0 1643 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 AOX1Q06278 1338 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 CCZ1BP86790 482 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 TXLNBQ8N3L3 684 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 GNAI3P08754 354 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 PDCP20941 246 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 ARGLU1Q9NWB6 273 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
CTNNA1-230ENST00000521724 TTC21AQ8NDW8 1320 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 BECN2A8MW95 431 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 ME3Q16798 604 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 KRBA2Q6ZNG9 492 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 L2HGDHQ9H9P8 463 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-230ENST00000521724 TTC21BQ7Z4L5 1316 aa11.27□□□□□ -0.6
CTNNA1-230ENST00000521724 GPS2Q13227 327 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 IQCB1Q15051 598 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 ACEP12821 1306 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 ST3GAL1Q11201 340 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 MUM1L1Q5H9M0 696 aa11.27□□□□□ -0.61
CTNNA1-230ENST00000521724 SYT10Q6XYQ8 523 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms