RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-233ENST00000521562 FAM9BQ8IZU0 186 aa12.36□□□□□ -0.43
PTK2-233ENST00000521562 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
PTK2-233ENST00000521562 DBF4Q9UBU7 674 aaPredicted RBP12.36□□□□□ -0.43
PTK2-233ENST00000521562 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
PTK2-233ENST00000521562 LMNB1P20700 586 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
PTK2-233ENST00000521562 NMRK2Q9NPI5 230 aa12.35□□□□□ -0.43
PTK2-233ENST00000521562 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
PTK2-233ENST00000521562 ANKRD13DQ6ZTN6 518 aa12.34□□□□□ -0.43
PTK2-233ENST00000521562 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
PTK2-233ENST00000521562 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
PTK2-233ENST00000521562 HYPKQ9NX55 129 aa12.34□□□□□ -0.43
PTK2-233ENST00000521562 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
PTK2-233ENST00000521562 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
PTK2-233ENST00000521562 TAF1P21675 1872 aa12.33□□□□□ -0.44
PTK2-233ENST00000521562 IL16Q14005 1332 aa12.33□□□□□ -0.44
PTK2-233ENST00000521562 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
PTK2-233ENST00000521562 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
PTK2-233ENST00000521562 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
PTK2-233ENST00000521562 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 ISCA1Q9BUE6 129 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
PTK2-233ENST00000521562 LTBP3Q9NS15 1303 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
PTK2-233ENST00000521562 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
PTK2-233ENST00000521562 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
PTK2-233ENST00000521562 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
PTK2-233ENST00000521562 SOGA3Q5TF21 947 aa12.31□□□□□ -0.44
PTK2-233ENST00000521562 CCDC30Q5VVM6 783 aa12.31□□□□□ -0.44
PTK2-233ENST00000521562 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
PTK2-233ENST00000521562 TRMT112Q9UI30 125 aaKnown RBP12.31□□□□□ -0.44
PTK2-233ENST00000521562 COL4A1P02462 1669 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 FKBP4Q02790 459 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTK2-233ENST00000521562 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 FAM89AQ96GI7 184 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
PTK2-233ENST00000521562 RNF123Q5XPI4 1314 aa12.3□□□□□ -0.44
PTK2-233ENST00000521562 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
PTK2-233ENST00000521562 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 G2E3Q7L622 706 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
PTK2-233ENST00000521562 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 ABCC4O15439 1325 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 COL4A5P29400 1685 aa12.29□□□□□ -0.44
PTK2-233ENST00000521562 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
PTK2-233ENST00000521562 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
PTK2-233ENST00000521562 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
PTK2-233ENST00000521562 RTKN2Q8IZC4 609 aa12.28□□□□□ -0.44
PTK2-233ENST00000521562 MYD88Q99836 296 aa12.28□□□□□ -0.44
PTK2-233ENST00000521562 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
PTK2-233ENST00000521562 POTECB2RU33 542 aa12.27□□□□□ -0.45
PTK2-233ENST00000521562 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
PTK2-233ENST00000521562 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.45
PTK2-233ENST00000521562 VAMP4O75379 141 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 TOMM70O94826 608 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 PSMD1Q99460 953 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
PTK2-233ENST00000521562 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 ZNF521Q96K83 1311 aa12.26□□□□□ -0.45
PTK2-233ENST00000521562 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 IRS4O14654 1257 aaPredicted RBP12.25□□□□□ -0.45
PTK2-233ENST00000521562 DDNO94850 711 aaPredicted RBP12.25□□□□□ -0.45
PTK2-233ENST00000521562 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
PTK2-233ENST00000521562 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 IARSP41252 1262 aaKnown RBP12.25□□□□□ -0.45
PTK2-233ENST00000521562 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 ZNF541Q9H0D2 1346 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
PTK2-233ENST00000521562 PCNTO95613 3336 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 GRAPQ13588 217 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 DDX46Q7L014 1031 aaKnown RBP12.24□□□□□ -0.45
PTK2-233ENST00000521562 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
PTK2-233ENST00000521562 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
PTK2-233ENST00000521562 CWC25Q9NXE8 425 aaPredicted RBP12.24□□□□□ -0.45
PTK2-233ENST00000521562 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
PTK2-233ENST00000521562 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
PTK2-233ENST00000521562 HSPA6P17066 643 aa12.23□□□□□ -0.45
PTK2-233ENST00000521562 FLIIQ13045 1269 aa12.23□□□□□ -0.45
PTK2-233ENST00000521562 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms