RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 KDM3BQ7LBC6 1761 aa24.72■■□□□ 1.55
SNHG6-204ENST00000521127 UBN2Q6ZU65 1347 aa24.71■■□□□ 1.55
SNHG6-204ENST00000521127 RASSF10A6NK89 507 aa24.71■■□□□ 1.55
SNHG6-204ENST00000521127 GPTP24298 496 aa24.71■■□□□ 1.55
SNHG6-204ENST00000521127 HOXA10P31260 410 aaPredicted RBP24.71■■□□□ 1.55
SNHG6-204ENST00000521127 JDP2Q8WYK2 163 aa24.71■■□□□ 1.55
SNHG6-204ENST00000521127 AIDAQ96BJ3 306 aa24.71■■□□□ 1.55
SNHG6-204ENST00000521127 SUSD4Q5VX71 490 aa24.7■■□□□ 1.54
SNHG6-204ENST00000521127 CC2D2BQ6DHV5 1058 aa24.7■■□□□ 1.54
SNHG6-204ENST00000521127 PNISRQ8TF01 805 aaKnown RBP24.7■■□□□ 1.54
SNHG6-204ENST00000521127 GJA3Q9Y6H8 435 aa24.7■■□□□ 1.54
SNHG6-204ENST00000521127 LTBP1Q14766 1721 aa24.69■■□□□ 1.54
SNHG6-204ENST00000521127 DEFB115Q30KQ5 88 aa24.69■■□□□ 1.54
SNHG6-204ENST00000521127 THUMPD2Q9BTF0 503 aaKnown RBP24.69■■□□□ 1.54
SNHG6-204ENST00000521127 MYL6BP14649 208 aa24.68■■□□□ 1.54
SNHG6-204ENST00000521127 EIF6P56537 245 aaKnown RBP24.68■■□□□ 1.54
SNHG6-204ENST00000521127 KIF6Q6ZMV9 814 aa24.68■■□□□ 1.54
SNHG6-204ENST00000521127 RPGRQ92834 1020 aaKnown RBP24.68■■□□□ 1.54
SNHG6-204ENST00000521127 ZBTB3Q9H5J0 574 aa24.68■■□□□ 1.54
SNHG6-204ENST00000521127 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
SNHG6-204ENST00000521127 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
SNHG6-204ENST00000521127 LBX1P52954 281 aa24.67■■□□□ 1.54
SNHG6-204ENST00000521127 FMR1Q06787 632 aaKnown RBP eCLIP24.67■■□□□ 1.54
SNHG6-204ENST00000521127 C3orf67Q6ZVT6 689 aa24.67■■□□□ 1.54
SNHG6-204ENST00000521127 ZNF34Q8IZ26 560 aa24.67■■□□□ 1.54
SNHG6-204ENST00000521127 PLEKHF1Q96S99 279 aa24.67■■□□□ 1.54
SNHG6-204ENST00000521127 EPS15P42566 896 aa24.66■■□□□ 1.54
SNHG6-204ENST00000521127 SCNN1DP51172 638 aa24.66■■□□□ 1.54
SNHG6-204ENST00000521127 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
SNHG6-204ENST00000521127 CRAMP1Q96RY5 1269 aa24.66■■□□□ 1.54
SNHG6-204ENST00000521127 DDX21Q9NR30 783 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNHG6-204ENST00000521127 TCERG1O14776 1098 aaKnown RBP24.65■■□□□ 1.54
SNHG6-204ENST00000521127 NTSR2O95665 410 aa24.65■■□□□ 1.54
SNHG6-204ENST00000521127 WDR33Q9C0J8 1336 aaKnown RBP24.64■■□□□ 1.54
SNHG6-204ENST00000521127 HSPA8P11142 646 aaKnown RBP24.64■■□□□ 1.54
SNHG6-204ENST00000521127 NFE2L2Q16236 605 aa24.64■■□□□ 1.54
SNHG6-204ENST00000521127 RBM17Q96I25 401 aaKnown RBP24.64■■□□□ 1.54
SNHG6-204ENST00000521127 ABT1Q9ULW3 272 aaKnown RBP24.64■■□□□ 1.54
SNHG6-204ENST00000521127 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
SNHG6-204ENST00000521127 NEFMP07197 916 aa24.63■■□□□ 1.53
SNHG6-204ENST00000521127 LMOD1P29536 600 aaPredicted RBP24.63■■□□□ 1.53
SNHG6-204ENST00000521127 GIGYF2Q6Y7W6 1299 aaKnown RBP24.63■■□□□ 1.53
SNHG6-204ENST00000521127 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
SNHG6-204ENST00000521127 LRP10Q7Z4F1 713 aa24.61■■□□□ 1.53
SNHG6-204ENST00000521127 TRAF5O00463 557 aa24.59■■□□□ 1.53
SNHG6-204ENST00000521127 MAP2K1Q02750 393 aaPredicted RBP24.59■■□□□ 1.53
SNHG6-204ENST00000521127 PDIA6Q15084 440 aa24.59■■□□□ 1.53
SNHG6-204ENST00000521127 NIM1KQ8IY84 436 aa24.59■■□□□ 1.53
SNHG6-204ENST00000521127 ERBB4Q15303 1308 aa24.59■■□□□ 1.53
SNHG6-204ENST00000521127 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
SNHG6-204ENST00000521127 AOC3Q16853 763 aa24.58■■□□□ 1.53
SNHG6-204ENST00000521127 PARP10Q53GL7 1025 aa24.58■■□□□ 1.53
SNHG6-204ENST00000521127 CST9Q5W186 159 aa24.58■■□□□ 1.53
SNHG6-204ENST00000521127 USP50Q70EL3 339 aaPredicted RBP24.58■■□□□ 1.53
SNHG6-204ENST00000521127 PPP1R42Q7Z4L9 355 aa24.58■■□□□ 1.53
SNHG6-204ENST00000521127 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
SNHG6-204ENST00000521127 CAPNS2Q96L46 248 aa24.57■■□□□ 1.52
SNHG6-204ENST00000521127 NLRP3Q96P20 1036 aa24.57■■□□□ 1.52
SNHG6-204ENST00000521127 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
SNHG6-204ENST00000521127 TRPM7Q96QT4 1865 aa24.57■■□□□ 1.52
SNHG6-204ENST00000521127 PROSER3Q2NL68 480 aa24.56■■□□□ 1.52
SNHG6-204ENST00000521127 ANXA1P04083 346 aa24.55■■□□□ 1.52
SNHG6-204ENST00000521127 CYP4F22Q6NT55 531 aa24.55■■□□□ 1.52
SNHG6-204ENST00000521127 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
SNHG6-204ENST00000521127 GPRC5DQ9NZD1 345 aa24.55■■□□□ 1.52
SNHG6-204ENST00000521127 ABCC4O15439 1325 aa24.55■■□□□ 1.52
SNHG6-204ENST00000521127 THSD7BQ9C0I4 1608 aa24.54■■□□□ 1.52
SNHG6-204ENST00000521127 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
SNHG6-204ENST00000521127 CXCL9Q07325 125 aa24.54■■□□□ 1.52
SNHG6-204ENST00000521127 ABHD8Q96I13 439 aa24.54■■□□□ 1.52
SNHG6-204ENST00000521127 TSPYL4Q9UJ04 414 aa24.54■■□□□ 1.52
SNHG6-204ENST00000521127 PAXIP1Q6ZW49 1069 aaPredicted RBP24.53■■□□□ 1.52
SNHG6-204ENST00000521127 RTFDC1Q9BY42 306 aaPredicted RBP24.53■■□□□ 1.52
SNHG6-204ENST00000521127 VPS33BQ9H267 617 aa24.53■■□□□ 1.52
SNHG6-204ENST00000521127 ADARB2Q9NS39 739 aaKnown RBP24.53■■□□□ 1.52
SNHG6-204ENST00000521127 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
SNHG6-204ENST00000521127 GRM1Q13255 1194 aa24.52■■□□□ 1.52
SNHG6-204ENST00000521127 GPR101Q96P66 508 aaPredicted RBP24.52■■□□□ 1.52
SNHG6-204ENST00000521127 TLL2Q9Y6L7 1015 aa24.52■■□□□ 1.52
SNHG6-204ENST00000521127 MAPK8IP3Q9UPT6 1336 aa24.52■■□□□ 1.52
SNHG6-204ENST00000521127 ECE1P42892 770 aa24.51■■□□□ 1.51
SNHG6-204ENST00000521127 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
SNHG6-204ENST00000521127 LAMB2P55268 1798 aa24.5■■□□□ 1.51
SNHG6-204ENST00000521127 HCLS1P14317 486 aaPredicted RBP24.5■■□□□ 1.51
SNHG6-204ENST00000521127 GMPSP49915 693 aaPredicted RBP24.5■■□□□ 1.51
SNHG6-204ENST00000521127 SP8Q8IXZ3 490 aa24.5■■□□□ 1.51
SNHG6-204ENST00000521127 PNNQ9H307 717 aaKnown RBP24.5■■□□□ 1.51
SNHG6-204ENST00000521127 AOC2O75106 756 aa24.49■■□□□ 1.51
SNHG6-204ENST00000521127 BBOX1O75936 387 aa24.49■■□□□ 1.51
SNHG6-204ENST00000521127 NLRP10Q86W26 655 aa24.49■■□□□ 1.51
SNHG6-204ENST00000521127 SUPT20HQ8NEM7 779 aa24.49■■□□□ 1.51
SNHG6-204ENST00000521127 RIPK4P57078 832 aa24.48■■□□□ 1.51
SNHG6-204ENST00000521127 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
SNHG6-204ENST00000521127 COPS6Q7L5N1 327 aa24.48■■□□□ 1.51
SNHG6-204ENST00000521127 MPNDQ8N594 471 aa24.48■■□□□ 1.51
SNHG6-204ENST00000521127 NECTIN2Q92692 538 aa24.48■■□□□ 1.51
SNHG6-204ENST00000521127 GLIS2Q9BZE0 524 aaPredicted RBP24.48■■□□□ 1.51
SNHG6-204ENST00000521127 HIRAP54198 1017 aaPredicted RBP24.47■■□□□ 1.51
SNHG6-204ENST00000521127 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
SNHG6-204ENST00000521127 AIMP1Q12904 312 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms