RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
CLK4-208ENST00000520957 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
CLK4-208ENST00000520957 BRIP1Q9BX63 1249 aa15.78■□□□□ 0.12
CLK4-208ENST00000520957 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
CLK4-208ENST00000520957 NEURL1BA8MQ27 555 aa15.77■□□□□ 0.12
CLK4-208ENST00000520957 HCLS1P14317 486 aaPredicted RBP15.77■□□□□ 0.12
CLK4-208ENST00000520957 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
CLK4-208ENST00000520957 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
CLK4-208ENST00000520957 TGFB2P61812 414 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 ST5P78524 1137 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 NUP98P52948 1817 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
CLK4-208ENST00000520957 NEXNQ0ZGT2 675 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 C2CD5Q86YS7 1000 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 CCDC191Q8NCU4 936 aa15.76■□□□□ 0.11
CLK4-208ENST00000520957 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
CLK4-208ENST00000520957 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
CLK4-208ENST00000520957 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
CLK4-208ENST00000520957 PXDNLA1KZ92 1463 aa15.75■□□□□ 0.11
CLK4-208ENST00000520957 GCKRQ14397 625 aa15.74■□□□□ 0.11
CLK4-208ENST00000520957 SLC10A5Q5PT55 438 aa15.74■□□□□ 0.11
CLK4-208ENST00000520957 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
CLK4-208ENST00000520957 PTPRCP08575 1304 aa15.74■□□□□ 0.11
CLK4-208ENST00000520957 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
CLK4-208ENST00000520957 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
CLK4-208ENST00000520957 PDE6BP35913 854 aa15.73■□□□□ 0.11
CLK4-208ENST00000520957 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
CLK4-208ENST00000520957 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
CLK4-208ENST00000520957 H0YIN7 160 aa15.73■□□□□ 0.11
CLK4-208ENST00000520957 SRGNP10124 158 aa15.73■□□□□ 0.11
CLK4-208ENST00000520957 YBX3P16989 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLK4-208ENST00000520957 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLK4-208ENST00000520957 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
CLK4-208ENST00000520957 H7C1W4 665 aa15.72■□□□□ 0.11
CLK4-208ENST00000520957 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
CLK4-208ENST00000520957 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
CLK4-208ENST00000520957 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
CLK4-208ENST00000520957 CLUAP1Q96AJ1 413 aa15.72■□□□□ 0.11
CLK4-208ENST00000520957 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
CLK4-208ENST00000520957 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
CLK4-208ENST00000520957 TRIM27P14373 513 aa15.71■□□□□ 0.11
CLK4-208ENST00000520957 SRCIN1Q9C0H9 1055 aa15.71■□□□□ 0.11
CLK4-208ENST00000520957 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
CLK4-208ENST00000520957 CASP7P55210 303 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 SLC51AQ86UW1 340 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 NLRP3Q96P20 1036 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 BCS1LQ9Y276 419 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 PLIN1O60240 522 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 GPR162Q16538 588 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
CLK4-208ENST00000520957 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
CLK4-208ENST00000520957 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
CLK4-208ENST00000520957 KIF16BQ96L93 1317 aa15.69■□□□□ 0.1
CLK4-208ENST00000520957 NBPF7P0C2Y1 421 aaPredicted RBP15.69■□□□□ 0.1
CLK4-208ENST00000520957 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
CLK4-208ENST00000520957 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
CLK4-208ENST00000520957 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
CLK4-208ENST00000520957 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
CLK4-208ENST00000520957 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
CLK4-208ENST00000520957 MASTLQ96GX5 879 aa15.68■□□□□ 0.1
CLK4-208ENST00000520957 GRM8O00222 908 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 RLBP1P12271 317 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 NPR1P16066 1061 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
CLK4-208ENST00000520957 ANKRD31Q8N7Z5 1873 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 STYK1Q6J9G0 422 aa15.67■□□□□ 0.1
CLK4-208ENST00000520957 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
CLK4-208ENST00000520957 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
CLK4-208ENST00000520957 HOXA10P31260 410 aaPredicted RBP15.66■□□□□ 0.1
CLK4-208ENST00000520957 RPGRQ92834 1020 aaKnown RBP15.66■□□□□ 0.1
CLK4-208ENST00000520957 KIAA1551Q9HCM1 1747 aa15.66■□□□□ 0.1
CLK4-208ENST00000520957 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
CLK4-208ENST00000520957 TNRC6CQ9HCJ0 1690 aaKnown RBP15.66■□□□□ 0.1
CLK4-208ENST00000520957 ABCC4O15439 1325 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 CACNA1FO60840 1977 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 C21orf2O43822 256 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 PDE8AO60658 829 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 CCT4P50991 539 aaKnown RBP15.65■□□□□ 0.1
CLK4-208ENST00000520957 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
CLK4-208ENST00000520957 PRPF40BQ6NWY9 871 aaKnown RBP15.65■□□□□ 0.1
CLK4-208ENST00000520957 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 ANKRD36CQ5JPF3 1778 aa15.65■□□□□ 0.1
CLK4-208ENST00000520957 FOXO4P98177 505 aa15.64■□□□□ 0.09
CLK4-208ENST00000520957 INTS3Q68E01 1043 aaKnown RBP15.64■□□□□ 0.09
CLK4-208ENST00000520957 TTLL11Q8NHH1 800 aa15.64■□□□□ 0.09
CLK4-208ENST00000520957 C7orf43Q8WVR3 580 aa15.64■□□□□ 0.09
CLK4-208ENST00000520957 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms