RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 SMC1BQ8NDV3 1235 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 RPGRQ92834 1020 aaKnown RBP13.7□□□□□ -0.22
EXTL3-208ENST00000520940 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
EXTL3-208ENST00000520940 CHPF2Q9P2E5 772 aa13.7□□□□□ -0.22
EXTL3-208ENST00000520940 APAF1O14727 1248 aa13.69□□□□□ -0.22
EXTL3-208ENST00000520940 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-208ENST00000520940 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-208ENST00000520940 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
EXTL3-208ENST00000520940 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
EXTL3-208ENST00000520940 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-208ENST00000520940 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
EXTL3-208ENST00000520940 TAF1P21675 1872 aa13.68□□□□□ -0.22
EXTL3-208ENST00000520940 POTECB2RU33 542 aa13.68□□□□□ -0.22
EXTL3-208ENST00000520940 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
EXTL3-208ENST00000520940 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
EXTL3-208ENST00000520940 PCNTO95613 3336 aa13.67□□□□□ -0.22
EXTL3-208ENST00000520940 DDNO94850 711 aaPredicted RBP13.67□□□□□ -0.22
EXTL3-208ENST00000520940 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
EXTL3-208ENST00000520940 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
EXTL3-208ENST00000520940 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
EXTL3-208ENST00000520940 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
EXTL3-208ENST00000520940 COL4A5P29400 1685 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 IARSP41252 1262 aaKnown RBP13.66□□□□□ -0.22
EXTL3-208ENST00000520940 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
EXTL3-208ENST00000520940 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 CC2D2BQ6DHV5 1058 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 PSMD1Q99460 953 aa13.66□□□□□ -0.22
EXTL3-208ENST00000520940 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
EXTL3-208ENST00000520940 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
EXTL3-208ENST00000520940 GNAI1P63096 354 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 HTRA3P83110 453 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 SLC51AQ86UW1 340 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
EXTL3-208ENST00000520940 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
EXTL3-208ENST00000520940 ABCC4O15439 1325 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 ADAMTSL1Q8N6G6 1762 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 CCDC184Q52MB2 194 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 DNAJC5GQ8N7S2 189 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
EXTL3-208ENST00000520940 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
EXTL3-208ENST00000520940 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
EXTL3-208ENST00000520940 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
EXTL3-208ENST00000520940 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
EXTL3-208ENST00000520940 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
EXTL3-208ENST00000520940 FZD9O00144 591 aa13.62□□□□□ -0.23
EXTL3-208ENST00000520940 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
EXTL3-208ENST00000520940 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
EXTL3-208ENST00000520940 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
EXTL3-208ENST00000520940 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
EXTL3-208ENST00000520940 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
EXTL3-208ENST00000520940 MYH3P11055 1940 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
EXTL3-208ENST00000520940 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 ELL2O00472 640 aaPredicted RBP13.6□□□□□ -0.23
EXTL3-208ENST00000520940 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
EXTL3-208ENST00000520940 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
EXTL3-208ENST00000520940 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
EXTL3-208ENST00000520940 COL4A1P02462 1669 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
EXTL3-208ENST00000520940 GRAPQ13588 217 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 GPC2Q8N158 579 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
EXTL3-208ENST00000520940 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
EXTL3-208ENST00000520940 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
EXTL3-208ENST00000520940 PPIP5K2O43314 1243 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 ANP32CO43423 234 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 BBOX1O75936 387 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
EXTL3-208ENST00000520940 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
EXTL3-208ENST00000520940 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
EXTL3-208ENST00000520940 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
EXTL3-208ENST00000520940 EPHX2P34913 555 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms