RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 DDX21Q9NR30 783 aaKnown RBP eCLIP13.99□□□□□ -0.17
PVT1-209ENST00000520913 CACNA1FO60840 1977 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 MYH3P11055 1940 aa13.98□□□□□ -0.17
PVT1-209ENST00000520913 SUSD4Q5VX71 490 aa13.98□□□□□ -0.17
PVT1-209ENST00000520913 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
PVT1-209ENST00000520913 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
PVT1-209ENST00000520913 APAF1O14727 1248 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 APLP1P51693 650 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
PVT1-209ENST00000520913 FSTL1Q12841 308 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 DPY19L2Q6NUT2 758 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
PVT1-209ENST00000520913 VEGFAP15692 232 aaPredicted RBP13.96□□□□□ -0.17
PVT1-209ENST00000520913 GNAI1P63096 354 aa13.96□□□□□ -0.17
PVT1-209ENST00000520913 AIMP1Q12904 312 aaKnown RBP13.96□□□□□ -0.17
PVT1-209ENST00000520913 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
PVT1-209ENST00000520913 MBIPQ9NS73 344 aa13.96□□□□□ -0.17
PVT1-209ENST00000520913 IFT57Q9NWB7 429 aa13.96□□□□□ -0.17
PVT1-209ENST00000520913 ZNF853P0CG23 659 aa13.95□□□□□ -0.18
PVT1-209ENST00000520913 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
PVT1-209ENST00000520913 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
PVT1-209ENST00000520913 DBF4Q9UBU7 674 aaPredicted RBP13.95□□□□□ -0.18
PVT1-209ENST00000520913 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
PVT1-209ENST00000520913 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
PVT1-209ENST00000520913 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
PVT1-209ENST00000520913 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
PVT1-209ENST00000520913 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
PVT1-209ENST00000520913 RBM17Q96I25 401 aaKnown RBP13.94□□□□□ -0.18
PVT1-209ENST00000520913 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
PVT1-209ENST00000520913 SPEF2Q9C093 1822 aa13.94□□□□□ -0.18
PVT1-209ENST00000520913 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
PVT1-209ENST00000520913 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 PSMD1Q99460 953 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 HYPKQ9NX55 129 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 COL4A5P29400 1685 aa13.93□□□□□ -0.18
PVT1-209ENST00000520913 ANP32CO43423 234 aa13.92□□□□□ -0.18
PVT1-209ENST00000520913 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
PVT1-209ENST00000520913 GRIPAP1Q4V328 841 aa13.92□□□□□ -0.18
PVT1-209ENST00000520913 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
PVT1-209ENST00000520913 ZNF277Q9NRM2 450 aaPredicted RBP13.92□□□□□ -0.18
PVT1-209ENST00000520913 LTBP1Q14766 1721 aa13.92□□□□□ -0.18
PVT1-209ENST00000520913 ABCC4O15439 1325 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 POTECB2RU33 542 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
PVT1-209ENST00000520913 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
PVT1-209ENST00000520913 IQCA1LA6NCM1 817 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 DDNO94850 711 aaPredicted RBP13.9□□□□□ -0.18
PVT1-209ENST00000520913 ANKRD13DQ6ZTN6 518 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 SYNE4Q8N205 404 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 DUOX1Q9NRD9 1551 aa13.9□□□□□ -0.18
PVT1-209ENST00000520913 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.19
PVT1-209ENST00000520913 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
PVT1-209ENST00000520913 CCDC27Q2M243 656 aa13.89□□□□□ -0.19
PVT1-209ENST00000520913 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
PVT1-209ENST00000520913 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
PVT1-209ENST00000520913 PCNTO95613 3336 aa13.89□□□□□ -0.19
PVT1-209ENST00000520913 HCLS1P14317 486 aaPredicted RBP13.88□□□□□ -0.19
PVT1-209ENST00000520913 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
PVT1-209ENST00000520913 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
PVT1-209ENST00000520913 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
PVT1-209ENST00000520913 COL4A1P02462 1669 aa13.88□□□□□ -0.19
PVT1-209ENST00000520913 PSME4Q14997 1843 aa13.87□□□□□ -0.19
PVT1-209ENST00000520913 FZD9O00144 591 aa13.87□□□□□ -0.19
PVT1-209ENST00000520913 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
PVT1-209ENST00000520913 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
PVT1-209ENST00000520913 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
PVT1-209ENST00000520913 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
PVT1-209ENST00000520913 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
PVT1-209ENST00000520913 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
PVT1-209ENST00000520913 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 GRAPQ13588 217 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 GPC2Q8N158 579 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 GRAPLQ8TC17 118 aaPredicted RBP13.86□□□□□ -0.19
PVT1-209ENST00000520913 TSR2Q969E8 191 aaKnown RBP13.86□□□□□ -0.19
PVT1-209ENST00000520913 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
PVT1-209ENST00000520913 IL16Q14005 1332 aa13.86□□□□□ -0.19
PVT1-209ENST00000520913 BBOX1O75936 387 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 DDX58O95786 925 aaKnown RBP13.85□□□□□ -0.19
PVT1-209ENST00000520913 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
PVT1-209ENST00000520913 TRIM28Q13263 835 aaKnown RBP13.85□□□□□ -0.19
PVT1-209ENST00000520913 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 SUPT20HQ8NEM7 779 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
PVT1-209ENST00000520913 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms