RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 C20orf204Q6ZNR8 217 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 SIX5Q8N196 739 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 ZNF594Q96JF6 807 aaPredicted RBP9.46□□□□□ -0.9
CLK4-207ENST00000520909 ATAD2Q6PL18 1390 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 TBC1D8BQ0IIM8 1120 aa9.45□□□□□ -0.9
CLK4-207ENST00000520909 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
CLK4-207ENST00000520909 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
CLK4-207ENST00000520909 IGFLR1Q9H665 355 aa9.45□□□□□ -0.9
CLK4-207ENST00000520909 C21orf2O43822 256 aa9.44□□□□□ -0.9
CLK4-207ENST00000520909 BTLAQ7Z6A9 289 aa9.44□□□□□ -0.9
CLK4-207ENST00000520909 UBE2OQ9C0C9 1292 aaKnown RBP9.44□□□□□ -0.9
CLK4-207ENST00000520909 EFCC1Q9HA90 598 aa9.44□□□□□ -0.9
CLK4-207ENST00000520909 C9orf172C9J069 976 aa9.43□□□□□ -0.9
CLK4-207ENST00000520909 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
CLK4-207ENST00000520909 FOXD4L3Q6VB84 417 aaPredicted RBP9.43□□□□□ -0.9
CLK4-207ENST00000520909 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
CLK4-207ENST00000520909 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
CLK4-207ENST00000520909 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
CLK4-207ENST00000520909 RASA1P20936 1047 aa9.42□□□□□ -0.9
CLK4-207ENST00000520909 SEC13P55735 322 aa9.42□□□□□ -0.9
CLK4-207ENST00000520909 DYRK3O43781 588 aa9.41□□□□□ -0.9
CLK4-207ENST00000520909 DKK1O94907 266 aa9.41□□□□□ -0.9
CLK4-207ENST00000520909 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
CLK4-207ENST00000520909 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
CLK4-207ENST00000520909 PRKCSHP14314 528 aaPredicted RBP9.4□□□□□ -0.9
CLK4-207ENST00000520909 PNMA5Q96PV4 448 aa9.4□□□□□ -0.9
CLK4-207ENST00000520909 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
CLK4-207ENST00000520909 SLC6A14Q9UN76 642 aa9.4□□□□□ -0.9
CLK4-207ENST00000520909 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
CLK4-207ENST00000520909 ELNP15502 786 aa9.39□□□□□ -0.91
CLK4-207ENST00000520909 RAC1P63000 192 aa9.39□□□□□ -0.91
CLK4-207ENST00000520909 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
CLK4-207ENST00000520909 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
CLK4-207ENST00000520909 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
CLK4-207ENST00000520909 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
CLK4-207ENST00000520909 GSX2Q9BZM3 304 aa9.38□□□□□ -0.91
CLK4-207ENST00000520909 NRG1Q02297 640 aaPredicted RBP9.37□□□□□ -0.91
CLK4-207ENST00000520909 CCINQ13939 588 aa9.37□□□□□ -0.91
CLK4-207ENST00000520909 IER5Q5VY09 327 aa9.37□□□□□ -0.91
CLK4-207ENST00000520909 DNAJB12Q9NXW2 375 aaKnown RBP9.37□□□□□ -0.91
CLK4-207ENST00000520909 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
CLK4-207ENST00000520909 RGS9O75916 674 aaPredicted RBP9.36□□□□□ -0.91
CLK4-207ENST00000520909 SELPP16109 830 aa9.36□□□□□ -0.91
CLK4-207ENST00000520909 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
CLK4-207ENST00000520909 RTN1Q16799 776 aa9.36□□□□□ -0.91
CLK4-207ENST00000520909 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
CLK4-207ENST00000520909 LENG1Q96BZ8 264 aaPredicted RBP9.36□□□□□ -0.91
CLK4-207ENST00000520909 AFF1P51825 1210 aaKnown RBP9.35□□□□□ -0.91
CLK4-207ENST00000520909 MBTPS1Q14703 1052 aa9.35□□□□□ -0.91
CLK4-207ENST00000520909 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
CLK4-207ENST00000520909 ARTNQ5T4W7 220 aa9.35□□□□□ -0.91
CLK4-207ENST00000520909 ZFP64Q9NPA5 681 aa9.35□□□□□ -0.91
CLK4-207ENST00000520909 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
CLK4-207ENST00000520909 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 H2AFB2P0C5Z0 115 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 EPB42P16452 691 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 NFKB1P19838 968 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 PCSK7Q16549 785 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 GLMNQ92990 594 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 KRTAP9-9Q9BYP9 154 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 KRTAP9-4Q9BYQ2 154 aa9.34□□□□□ -0.91
CLK4-207ENST00000520909 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
CLK4-207ENST00000520909 USP21Q9UK80 565 aa9.33□□□□□ -0.92
CLK4-207ENST00000520909 SHISA2Q6UWI4 295 aa9.32□□□□□ -0.92
CLK4-207ENST00000520909 DMGDHQ9UI17 866 aaKnown RBP9.32□□□□□ -0.92
CLK4-207ENST00000520909 IGFBP4P22692 258 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 DPYDQ12882 1025 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
CLK4-207ENST00000520909 BCS1LQ9Y276 419 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 PTK7Q13308 1070 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
CLK4-207ENST00000520909 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 NAGPAQ9UK23 515 aa9.31□□□□□ -0.92
CLK4-207ENST00000520909 LGR5O75473 907 aa9.3□□□□□ -0.92
CLK4-207ENST00000520909 MAP3K6O95382 1288 aa9.3□□□□□ -0.92
CLK4-207ENST00000520909 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
CLK4-207ENST00000520909 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
CLK4-207ENST00000520909 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
CLK4-207ENST00000520909 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 CPB1P15086 417 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 INPP5BP32019 993 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 IDH3AP50213 366 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
CLK4-207ENST00000520909 ILDR2Q71H61 639 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 ANKMY2Q8IV38 441 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 TP53INP1Q96A56 240 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 CALR3Q96L12 384 aaKnown RBP9.29□□□□□ -0.92
CLK4-207ENST00000520909 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 C11orf16Q9NQ32 467 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 KLK14Q9P0G3 267 aa9.29□□□□□ -0.92
CLK4-207ENST00000520909 NBPF11Q86T75 865 aa9.28□□□□□ -0.92
CLK4-207ENST00000520909 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
CLK4-207ENST00000520909 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
CLK4-207ENST00000520909 FRRS1LQ9P0K9 344 aa9.28□□□□□ -0.92
CLK4-207ENST00000520909 ARSDP51689 593 aa9.27□□□□□ -0.93
CLK4-207ENST00000520909 ELMSAN1Q6PJG2 1045 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms