RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
CLK4-206ENST00000520878 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
CLK4-206ENST00000520878 PPFIA3O75145 1194 aa13.62□□□□□ -0.23
CLK4-206ENST00000520878 AK2P54819 239 aa13.62□□□□□ -0.23
CLK4-206ENST00000520878 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
CLK4-206ENST00000520878 MEGF6O75095 1541 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
CLK4-206ENST00000520878 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 FIBPO43427 364 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 ANAPC15P60006 121 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 TRMT112Q9UI30 125 aaKnown RBP13.61□□□□□ -0.23
CLK4-206ENST00000520878 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 IFIT1P09914 478 aaKnown RBP13.61□□□□□ -0.23
CLK4-206ENST00000520878 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 RBM27Q9P2N5 1060 aaKnown RBP13.61□□□□□ -0.23
CLK4-206ENST00000520878 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
CLK4-206ENST00000520878 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 APPP05067 770 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
CLK4-206ENST00000520878 TTC39AQ5SRH9 613 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
CLK4-206ENST00000520878 HSPA4P34932 840 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.6□□□□□ -0.23
CLK4-206ENST00000520878 NFAT5O94916 1531 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 AOX1Q06278 1338 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 PSMA5P28066 241 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
CLK4-206ENST00000520878 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
CLK4-206ENST00000520878 RAD50Q92878 1312 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 XRCC6P12956 609 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLK4-206ENST00000520878 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
CLK4-206ENST00000520878 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 MRE11P49959 708 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 METTL24Q5JXM2 366 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 SEC62Q99442 399 aaKnown RBP13.59□□□□□ -0.23
CLK4-206ENST00000520878 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
CLK4-206ENST00000520878 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
CLK4-206ENST00000520878 MTX1Q13505 466 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 LRRC24Q50LG9 513 aa13.59□□□□□ -0.23
CLK4-206ENST00000520878 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
CLK4-206ENST00000520878 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 PIGBQ92521 554 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 PUS3Q9BZE2 481 aaKnown RBP13.58□□□□□ -0.24
CLK4-206ENST00000520878 LSG1Q9H089 658 aaKnown RBP13.58□□□□□ -0.24
CLK4-206ENST00000520878 SALL3Q9BXA9 1300 aa13.58□□□□□ -0.24
CLK4-206ENST00000520878 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.57□□□□□ -0.24
CLK4-206ENST00000520878 CHGBP05060 677 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 SLFNL1Q499Z3 407 aa13.57□□□□□ -0.24
CLK4-206ENST00000520878 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
CLK4-206ENST00000520878 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
CLK4-206ENST00000520878 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
CLK4-206ENST00000520878 FAM184AQ8NB25 1140 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 DDX11Q96FC9 970 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 H3BQV1 296 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 KDM4AO75164 1064 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 PTMAP06454 111 aaKnown RBP13.56□□□□□ -0.24
CLK4-206ENST00000520878 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 LTN1O94822 1766 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 DDB1Q16531 1140 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 COPRSQ9NQ92 184 aa13.56□□□□□ -0.24
CLK4-206ENST00000520878 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
CLK4-206ENST00000520878 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 A0A1B0GUL7 405 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 SYCE3A1L190 88 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 GJB2P29033 226 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
CLK4-206ENST00000520878 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
CLK4-206ENST00000520878 NASPP49321 788 aaPredicted RBP13.55□□□□□ -0.24
CLK4-206ENST00000520878 HAND2P61296 217 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 RGPD1P0DJD0 1748 aa13.55□□□□□ -0.24
CLK4-206ENST00000520878 EYA2O00167 538 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
CLK4-206ENST00000520878 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
CLK4-206ENST00000520878 SYAP1Q96A49 352 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms