RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 COL3A1P02461 1466 aaPredicted RBP6.57□□□□□ -1.36
SDC2-204ENST00000519914 NLRP1Q9C000 1473 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 ALKQ9UM73 1620 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 KIF20BQ96Q89 1820 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 ZMYM3Q14202 1370 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 CGNL1Q0VF96 1302 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 GGT6Q6P531 493 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 CENPQQ7L2Z9 268 aaPredicted RBP6.56□□□□□ -1.36
SDC2-204ENST00000519914 EPS8L1Q8TE68 723 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 IPO9Q96P70 1041 aaKnown RBP6.56□□□□□ -1.36
SDC2-204ENST00000519914 KDM4CQ9H3R0 1056 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 NOP58Q9Y2X3 529 aaKnown RBP6.56□□□□□ -1.36
SDC2-204ENST00000519914 RIMBP3CA6NJZ7 1639 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 RIMBP3BA6NNM3 1639 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 RIMBP3Q9UFD9 1639 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 ARHGEF40Q8TER5 1519 aa6.56□□□□□ -1.36
SDC2-204ENST00000519914 CD163L1Q9NR16 1453 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 SPINT1O43278 529 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 RAPGEF3O95398 923 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 KRT76Q01546 638 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 PTK2Q05397 1052 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 IDI1Q13907 227 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 INTS6LQ5JSJ4 861 aaKnown RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 Q6ZVU0 165 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 WDR63Q8IWG1 891 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 CCDC155Q8N6L0 562 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 COL25A1Q9BXS0 654 aaPredicted RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 POLMQ9NP87 494 aaPredicted RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 TMPRSS4Q9NRS4 437 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 TRAK1Q9UPV9 953 aa6.55□□□□□ -1.36
SDC2-204ENST00000519914 YTHDC2Q9H6S0 1430 aaKnown RBP6.55□□□□□ -1.36
SDC2-204ENST00000519914 CDC14CA4D256 554 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 APAF1O14727 1248 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 ANP32AP39687 249 aaKnown RBP6.54□□□□□ -1.36
SDC2-204ENST00000519914 DHX9Q08211 1270 aaKnown RBP6.54□□□□□ -1.36
SDC2-204ENST00000519914 MORC1Q86VD1 984 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 WWC1Q8IX03 1113 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 ADAM32Q8TC27 787 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 OCSTAMPQ9BR26 566 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 PNPLA6Q8IY17 1366 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 NRXN3Q9Y4C0 1643 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 ATP7BP35670 1465 aa6.54□□□□□ -1.36
SDC2-204ENST00000519914 PLIN1O60240 522 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 CT47B1P0C2W7 299 aaPredicted RBP6.53□□□□□ -1.36
SDC2-204ENST00000519914 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 C20orf194Q5TEA3 1177 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 SLC12A5Q9H2X9 1139 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 CDV3Q9UKY7 258 aaKnown RBP6.53□□□□□ -1.36
SDC2-204ENST00000519914 A0A1W2PP64 1363 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 A2ML1A8K2U0 1454 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 TECPR2O15040 1411 aa6.53□□□□□ -1.36
SDC2-204ENST00000519914 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
SDC2-204ENST00000519914 TMEM132EQ6IEE7 984 aa6.52□□□□□ -1.37
SDC2-204ENST00000519914 DZIP3Q86Y13 1208 aaKnown RBP6.52□□□□□ -1.37
SDC2-204ENST00000519914 CFAP53Q96M91 514 aa6.52□□□□□ -1.37
SDC2-204ENST00000519914 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.52□□□□□ -1.37
SDC2-204ENST00000519914 HMX1Q9NP08 348 aaPredicted RBP6.52□□□□□ -1.37
SDC2-204ENST00000519914 IL16Q14005 1332 aa6.52□□□□□ -1.37
SDC2-204ENST00000519914 MON2Q7Z3U7 1717 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 SLC35F4A4IF30 521 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 RNFT1Q5M7Z0 435 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 PPP2R2DQ66LE6 453 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 KCTD17Q8N5Z5 321 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 ZNF784Q8NCA9 323 aaPredicted RBP6.51□□□□□ -1.37
SDC2-204ENST00000519914 SIRT1Q96EB6 747 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 DDRGK1Q96HY6 314 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 KIF13AQ9H1H9 1805 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 AKAP12Q02952 1782 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 ZC3H4Q9UPT8 1303 aaKnown RBP6.51□□□□□ -1.37
SDC2-204ENST00000519914 CPS1P31327 1500 aa6.51□□□□□ -1.37
SDC2-204ENST00000519914 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 ADD1P35611 737 aaKnown RBP6.5□□□□□ -1.37
SDC2-204ENST00000519914 MTHFSP49914 203 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 TCP11L2Q8N4U5 519 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 PLEKHF1Q96S99 279 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 CPSF1Q10570 1443 aaKnown RBP6.5□□□□□ -1.37
SDC2-204ENST00000519914 FAM135BQ49AJ0 1406 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 USP17L8P0C7I0 530 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 ITGA6P23229 1130 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 RARSP54136 660 aaKnown RBP6.5□□□□□ -1.37
SDC2-204ENST00000519914 NBPF20Q3BBV1 942 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 SV2AQ7L0J3 742 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 SVOPQ8N4V2 548 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 WHAMMQ8TF30 809 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 NANOS1Q8WY41 292 aaKnown RBP6.5□□□□□ -1.37
SDC2-204ENST00000519914 TERF2IPQ9NYB0 399 aa6.5□□□□□ -1.37
SDC2-204ENST00000519914 PPIP5K1Q6PFW1 1433 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 RIMS2Q9UQ26 1411 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 TSPOAP1O95153 1857 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 MAP2P11137 1827 aaKnown RBP6.49□□□□□ -1.37
SDC2-204ENST00000519914 AATKQ6ZMQ8 1374 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 KCNMA1Q12791 1236 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 C8orf34Q49A92 452 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms