RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 FAM181BA6NEQ2 426 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 ADH1AP07327 375 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 SCTRP47872 440 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 FOXD4L5Q5VV16 416 aaPredicted RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 NANOS1Q8WY41 292 aaKnown RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 ARID3AQ99856 593 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 NEO1Q92859 1461 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 SCAF11Q99590 1463 aaKnown RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 DIP2BQ9P265 1576 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 NOS1P29475 1434 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 ATP9BO43861 1147 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 PTGIRP43119 386 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 HNRNPUQ00839 825 aaKnown RBP eCLIP6.19□□□□□ -1.42
PABPC1-212ENST00000519622 ZNF326Q5BKZ1 582 aaKnown RBP6.19□□□□□ -1.42
PABPC1-212ENST00000519622 USP17L2Q6R6M4 530 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
PABPC1-212ENST00000519622 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
PABPC1-212ENST00000519622 MAFBQ9Y5Q3 323 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-212ENST00000519622 ERVK-7P63135 1459 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 NEXMIFQ5QGS0 1516 aa6.19□□□□□ -1.42
PABPC1-212ENST00000519622 BRD4O60885 1362 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-212ENST00000519622 RIMBP3CA6NJZ7 1639 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 RIMBP3BA6NNM3 1639 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 RIMBP3Q9UFD9 1639 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 KDM5AP29375 1690 aaKnown RBP6.18□□□□□ -1.42
PABPC1-212ENST00000519622 NCOA4Q13772 614 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 CFAP70Q5T0N1 1121 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 VWA5B2Q8N398 1253 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 NFATC2IPQ8NCF5 419 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 COL25A1Q9BXS0 654 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-212ENST00000519622 ARHGEF28Q8N1W1 1705 aaKnown RBP6.18□□□□□ -1.42
PABPC1-212ENST00000519622 INSRP06213 1382 aa6.18□□□□□ -1.42
PABPC1-212ENST00000519622 KTN1Q86UP2 1357 aaKnown RBP6.18□□□□□ -1.42
PABPC1-212ENST00000519622 PIK3C2GO75747 1445 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 CD109Q6YHK3 1445 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 RFX1P22670 979 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 ITGA6P23229 1130 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 LMOD1P29536 600 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-212ENST00000519622 ERVK-9P63128 1117 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 CC2D2BQ6DHV5 1058 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 MRS2Q9HD23 443 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 CUEDC1Q9NWM3 386 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-212ENST00000519622 SERPINA10Q9UK55 444 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 MYO5BQ9ULV0 1848 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 REREQ9P2R6 1566 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 USP32Q8NFA0 1604 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 SHPRHQ149N8 1683 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 PREX1Q8TCU6 1659 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 QRICH2Q9H0J4 1663 aa6.17□□□□□ -1.42
PABPC1-212ENST00000519622 YEATS2Q9ULM3 1422 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 SETD1AO15047 1707 aaKnown RBP6.16□□□□□ -1.42
PABPC1-212ENST00000519622 GSK3AP49840 483 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 EML3Q32P44 896 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 MYBBP1AQ9BQG0 1328 aaKnown RBP6.16□□□□□ -1.42
PABPC1-212ENST00000519622 SBNO2Q9Y2G9 1366 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 ARHGAP31Q2M1Z3 1444 aa6.16□□□□□ -1.42
PABPC1-212ENST00000519622 TULP4Q9NRJ4 1543 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 TMEM131LA2VDJ0 1609 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 CDC14CA4D256 554 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 RHOQP17081 205 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 CCDC125Q86Z20 511 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 PLEKHM2Q8IWE5 1019 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 WHAMMQ8TF30 809 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
PABPC1-212ENST00000519622 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
PABPC1-212ENST00000519622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-212ENST00000519622 A0A1W2PRU2 124 aa6.14□□□□□ -1.43
PABPC1-212ENST00000519622 STAU1O95793 577 aaKnown RBP6.14□□□□□ -1.43
PABPC1-212ENST00000519622 MYCP01106 439 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-212ENST00000519622 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-212ENST00000519622 CDCA8Q53HL2 280 aa6.14□□□□□ -1.43
PABPC1-212ENST00000519622 LYSMD3Q7Z3D4 306 aa6.14□□□□□ -1.43
PABPC1-212ENST00000519622 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
PABPC1-212ENST00000519622 CLTCQ00610 1675 aaKnown RBP6.14□□□□□ -1.43
PABPC1-212ENST00000519622 ATP5J2-PTCD1G3V325 749 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 KIF3BO15066 747 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 GTF2IP78347 998 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 USP4Q13107 963 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 RALBP1Q15311 655 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-212ENST00000519622 SV2AQ7L0J3 742 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 FAM9BQ8IZU0 186 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 ESF1Q9H501 851 aaKnown RBP6.13□□□□□ -1.43
PABPC1-212ENST00000519622 RAB6BQ9NRW1 208 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 NOD1Q9Y239 953 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 KIF13AQ9H1H9 1805 aa6.13□□□□□ -1.43
PABPC1-212ENST00000519622 AGLP35573 1532 aa6.12□□□□□ -1.43
PABPC1-212ENST00000519622 CLDN10P78369 228 aa6.12□□□□□ -1.43
PABPC1-212ENST00000519622 KANK1Q14678 1352 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms