RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ADCY9O60503 1353 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 KCNQ3O43525 872 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 CUL4AQ13619 759 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 IL1RAPL2Q9NP60 686 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 BAG6P46379 1132 aa12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 ANKRD24Q8TF21 1146 aa12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
SH2D4A-204ENST00000519207 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 EVA1CP58658 441 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 MCTP1Q6DN14 999 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 RBSNQ9H1K0 784 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 LMBRD1Q9NUN5 540 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 PKP1Q13835 747 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 IPO4Q8TEX9 1081 aaKnown RBP12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 ZDHHC9Q9Y397 364 aa12.16□□□□□ -0.46
SH2D4A-204ENST00000519207 HSPA4P34932 840 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 HMGN5P82970 282 aaKnown RBP12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 KSR2Q6VAB6 950 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 THSD7AQ9UPZ6 1657 aa12.15□□□□□ -0.46
SH2D4A-204ENST00000519207 SGSM2O43147 1006 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 CCDC39Q9UFE4 941 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 CPDO75976 1380 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
SH2D4A-204ENST00000519207 RAD50Q92878 1312 aa12.13□□□□□ -0.47
SH2D4A-204ENST00000519207 TRIM37O94972 964 aa12.13□□□□□ -0.47
SH2D4A-204ENST00000519207 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
SH2D4A-204ENST00000519207 UTYO14607 1347 aa12.13□□□□□ -0.47
SH2D4A-204ENST00000519207 BRD1O95696 1058 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 ANXA1P04083 346 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 FAM196AQ6ZSG2 479 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
SH2D4A-204ENST00000519207 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 PROSER3Q2NL68 480 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 IL25Q9H293 177 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 ABCC6O95255 1503 aa12.11□□□□□ -0.47
SH2D4A-204ENST00000519207 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 RUFY2Q8WXA3 655 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 GRM8O00222 908 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.477e-7■■■■■ 30.9
SH2D4A-204ENST00000519207 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
SH2D4A-204ENST00000519207 MBD3O95983 291 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 APBA3O96018 575 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 LRSAM1Q6UWE0 723 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 PDIA6Q15084 440 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 TTC14Q96N46 770 aa12.09□□□□□ -0.47
SH2D4A-204ENST00000519207 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.48
SH2D4A-204ENST00000519207 SLC20A2Q08357 652 aa12.08□□□□□ -0.48
SH2D4A-204ENST00000519207 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
SH2D4A-204ENST00000519207 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
SH2D4A-204ENST00000519207 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms