RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MNS1Q8NEH6 495 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 SUFUQ9UMX1 484 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 PHLPP2Q6ZVD8 1323 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 NRXN1Q9ULB1 1477 aa15.88■□□□□ 0.13
PABPC1-208ENST00000519004 IFT172Q9UG01 1749 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
PABPC1-208ENST00000519004 ST3GAL1Q11201 340 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 UNC5CLQ8IV45 518 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 OSBPL5Q9H0X9 879 aaPredicted RBP15.87■□□□□ 0.13
PABPC1-208ENST00000519004 KIF1CO43896 1103 aaKnown RBP15.87■□□□□ 0.13
PABPC1-208ENST00000519004 SATB1Q01826 763 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
PABPC1-208ENST00000519004 CEP89Q96ST8 783 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 CARD6Q9BX69 1037 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
PABPC1-208ENST00000519004 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 ADGRB1O14514 1584 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 SETBP1Q9Y6X0 1596 aa15.87■□□□□ 0.13
PABPC1-208ENST00000519004 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 FANCGO15287 622 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 FCHSD2O94868 740 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 EVCP57679 992 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 ETF1P62495 437 aaKnown RBP15.86■□□□□ 0.13
PABPC1-208ENST00000519004 NPHP3Q7Z494 1330 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 PRKAR2BP31323 418 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 KCNJ6P48051 423 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 NBPF11Q86T75 865 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 RASEFQ8IZ41 740 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 DNAI1Q9UI46 699 aa15.86■□□□□ 0.13
PABPC1-208ENST00000519004 CDK12Q9NYV4 1490 aaPredicted RBP15.85■□□□□ 0.13
PABPC1-208ENST00000519004 CDC37L1Q7L3B6 337 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 GGNBP2Q9H3C7 697 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 ARHGAP5Q13017 1502 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 DNAJC21Q5F1R6 531 aaKnown RBP15.85■□□□□ 0.13
PABPC1-208ENST00000519004 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
PABPC1-208ENST00000519004 HMMRO75330 724 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 CPA1P15085 419 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 LRRFIP1Q32MZ4 808 aaKnown RBP15.84■□□□□ 0.13
PABPC1-208ENST00000519004 DHX40Q8IX18 779 aaKnown RBP15.84■□□□□ 0.13
PABPC1-208ENST00000519004 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 GOLGA6L4A6NEF3 574 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 ANKRD65E5RJM6 399 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 ARMCX5Q6P1M9 558 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 TRIM65Q6PJ69 517 aa15.84■□□□□ 0.13
PABPC1-208ENST00000519004 GPR161Q8N6U8 529 aaKnown RBP15.84■□□□□ 0.13
PABPC1-208ENST00000519004 LEO1Q8WVC0 666 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-208ENST00000519004 MAP2K7O14733 419 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 EGFL6Q8IUX8 553 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 PGBD1Q96JS3 809 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 SPATA32Q96LK8 384 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 SCAND2PQ9GZW5 306 aaPredicted RBP15.83■□□□□ 0.12
PABPC1-208ENST00000519004 IMPACTQ9P2X3 320 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 PARP3Q9Y6F1 533 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 MAP2K2P36507 400 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 HOMER1Q86YM7 354 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 VPS18Q9P253 973 aa15.83■□□□□ 0.12
PABPC1-208ENST00000519004 UGGT1Q9NYU2 1555 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 CCDC189A1A4V9 331 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 URI1O94763 535 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-208ENST00000519004 ANKRD20A12PQ8NF67 263 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 TULP4Q9NRJ4 1543 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 MKRN1Q9UHC7 482 aaKnown RBP15.82■□□□□ 0.12
PABPC1-208ENST00000519004 IFIT2P09913 472 aaKnown RBP15.82■□□□□ 0.12
PABPC1-208ENST00000519004 STX1AQ16623 288 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 CEP120Q8N960 986 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 CCDC150Q8NCX0 1101 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 PARD6BQ9BYG5 372 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 TFIP11Q9UBB9 837 aaKnown RBP15.82■□□□□ 0.12
PABPC1-208ENST00000519004 STAP2Q9UGK3 403 aa15.82■□□□□ 0.12
PABPC1-208ENST00000519004 TET3O43151 1660 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 HECW2Q9P2P5 1572 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 SMC2O95347 1197 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 LONRF2Q1L5Z9 754 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 LARP1BQ659C4 914 aaKnown RBP15.81■□□□□ 0.12
PABPC1-208ENST00000519004 BICD2Q8TD16 824 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 LSG1Q9H089 658 aaKnown RBP15.81■□□□□ 0.12
PABPC1-208ENST00000519004 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
PABPC1-208ENST00000519004 BECN2A8MW95 431 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 PATL2C9JE40 543 aaKnown RBP15.8■□□□□ 0.12
PABPC1-208ENST00000519004 LRRC31Q6UY01 552 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
PABPC1-208ENST00000519004 TADA2BQ86TJ2 420 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
PABPC1-208ENST00000519004 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 ANKRD26Q9UPS8 1709 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 ABCA9Q8IUA7 1624 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms