RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ADAMTS8Q9UP79 889 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 ZBTB39O15060 712 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 EFSO43281 561 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 EPB42P16452 691 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 INPP5BP32019 993 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 EIF1AXP47813 144 aaKnown RBP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 IDH3AP50213 366 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 ARSDP51689 593 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 TNP2Q05952 138 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 TRIM26Q12899 539 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 ZNF385CQ66K41 422 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 SND1Q7KZF4 910 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 GTPBP3Q969Y2 492 aaKnown RBP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 CEP63Q96MT8 703 aa6.68□□□□□ -1.34
VPS13B-207ENST00000518569 ATXN7L1Q9ULK2 861 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-207ENST00000518569 OPLAHO14841 1288 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 BNIP3LO60238 219 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 GDF11O95390 407 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 ZAP70P43403 619 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 MARSP56192 900 aaKnown RBP6.67□□□□□ -1.34
VPS13B-207ENST00000518569 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-207ENST00000518569 BRD7Q9NPI1 651 aa6.67□□□□□ -1.34
VPS13B-207ENST00000518569 RPLP1P05386 114 aaKnown RBP6.66□□□□□ -1.34
VPS13B-207ENST00000518569 MAPTP10636 758 aaKnown RBP6.66□□□□□ -1.34
VPS13B-207ENST00000518569 MAP3K10Q02779 954 aa6.66□□□□□ -1.34
VPS13B-207ENST00000518569 RASSF7Q02833 373 aa6.66□□□□□ -1.34
VPS13B-207ENST00000518569 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
VPS13B-207ENST00000518569 WHAMMQ8TF30 809 aa6.66□□□□□ -1.34
VPS13B-207ENST00000518569 PIK3R5Q8WYR1 880 aa6.66□□□□□ -1.34
VPS13B-207ENST00000518569 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.34
VPS13B-207ENST00000518569 ADAMTS2O95450 1211 aa6.65□□□□□ -1.34
VPS13B-207ENST00000518569 MZF1P28698 734 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-207ENST00000518569 CITED4Q96RK1 184 aa6.65□□□□□ -1.34
VPS13B-207ENST00000518569 EFCC1Q9HA90 598 aa6.65□□□□□ -1.34
VPS13B-207ENST00000518569 MARK1Q9P0L2 795 aa6.65□□□□□ -1.34
VPS13B-207ENST00000518569 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-207ENST00000518569 KCNH4Q9UQ05 1017 aa6.65□□□□□ -1.34
VPS13B-207ENST00000518569 DCDC2BA2VCK2 349 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 FZD6O60353 706 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 EGFRP00533 1210 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 FGFR3P22607 806 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 IRS1P35568 1242 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 USP5P45974 858 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 ABHD17AQ96GS6 310 aa6.64□□□□□ -1.35
VPS13B-207ENST00000518569 RTCBQ9Y3I0 505 aaKnown RBP6.64□□□□□ -1.35
VPS13B-207ENST00000518569 NDUFB5O43674 189 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 SLURP2P0DP57 97 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 PCSK2P16519 638 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 GRNP28799 593 aaKnown RBP6.63□□□□□ -1.35
VPS13B-207ENST00000518569 SFSWAPQ12872 951 aaKnown RBP6.63□□□□□ -1.35
VPS13B-207ENST00000518569 AAMPQ13685 434 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 ATCAYQ86WG3 371 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 GPR152Q8TDT2 470 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 DCTN4Q9UJW0 460 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
VPS13B-207ENST00000518569 FNDC3AQ9Y2H6 1198 aaKnown RBP6.63□□□□□ -1.35
VPS13B-207ENST00000518569 GPR25O00155 361 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 PDGFAP04085 211 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 EHHADHQ08426 723 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 EDEM1Q92611 657 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 STRN4Q9NRL3 753 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 CCDC87Q9NVE4 849 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
VPS13B-207ENST00000518569 GSK3AP49840 483 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 DNM1Q05193 864 aaKnown RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 SRSF11Q05519 484 aaKnown RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 GAS6Q14393 721 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 GJD3Q8N144 294 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 NUDT16Q96DE0 195 aaKnown RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 GSX2Q9BZM3 304 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 AVENQ9NQS1 362 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 POLIQ9UNA4 740 aa6.61□□□□□ -1.35
VPS13B-207ENST00000518569 NSFL1CQ9UNZ2 370 aaKnown RBP6.61□□□□□ -1.35
VPS13B-207ENST00000518569 ARHGEF15O94989 841 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 CD33P20138 364 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 MX2P20592 715 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 MAP2K3P46734 347 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 CTBSQ01459 385 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 CCINQ13939 588 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 TMCO4Q5TGY1 634 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 TTC16Q8NEE8 873 aa6.6□□□□□ -1.35
VPS13B-207ENST00000518569 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-207ENST00000518569 XYLBO75191 536 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 BMP4P12644 408 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 NEUROD1Q13562 356 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
VPS13B-207ENST00000518569 GPAT2Q6NUI2 795 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms