RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 RFC4P35249 363 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 BCAMP50895 628 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 PROX2Q3B8N5 592 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
TTC1-202ENST00000518560 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 PHACTR3Q96KR7 559 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
TTC1-202ENST00000518560 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
TTC1-202ENST00000518560 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
TTC1-202ENST00000518560 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
TTC1-202ENST00000518560 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
TTC1-202ENST00000518560 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 KCNC4Q03721 635 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 ZBTB1Q9Y2K1 713 aa12.94□□□□□ -0.34
TTC1-202ENST00000518560 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
TTC1-202ENST00000518560 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
TTC1-202ENST00000518560 DDR1Q08345 913 aa12.93□□□□□ -0.34
TTC1-202ENST00000518560 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
TTC1-202ENST00000518560 COL15A1P39059 1388 aa12.93□□□□□ -0.34
TTC1-202ENST00000518560 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
TTC1-202ENST00000518560 A0A0G2JLW4 131 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
TTC1-202ENST00000518560 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 KCNQ3O43525 872 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
TTC1-202ENST00000518560 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
TTC1-202ENST00000518560 TEFQ10587 303 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 ZNF496Q96IT1 587 aaPredicted RBP12.91□□□□□ -0.34
TTC1-202ENST00000518560 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
TTC1-202ENST00000518560 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 DPEP1P16444 411 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 COL9A1P20849 921 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
TTC1-202ENST00000518560 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
TTC1-202ENST00000518560 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
TTC1-202ENST00000518560 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 MCM10Q7L590 875 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 ADCY9O60503 1353 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
TTC1-202ENST00000518560 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
TTC1-202ENST00000518560 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 ZNF526Q8TF50 670 aaPredicted RBP12.88□□□□□ -0.35
TTC1-202ENST00000518560 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 BCS1LQ9Y276 419 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 LAMB4A4D0S4 1761 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
TTC1-202ENST00000518560 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
TTC1-202ENST00000518560 CARMIL3Q8ND23 1372 aa12.87□□□□□ -0.35
TTC1-202ENST00000518560 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
TTC1-202ENST00000518560 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
TTC1-202ENST00000518560 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
TTC1-202ENST00000518560 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
TTC1-202ENST00000518560 ZPR1O75312 459 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 KCNA3P22001 575 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 TM4SF1P30408 202 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 CHRNA5P30532 468 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 TGFB2P61812 414 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 NFIXQ14938 502 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
TTC1-202ENST00000518560 SBF1O95248 1867 aa12.85□□□□□ -0.35
TTC1-202ENST00000518560 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
TTC1-202ENST00000518560 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
TTC1-202ENST00000518560 A1BGP04217 495 aa12.85□□□□□ -0.35
TTC1-202ENST00000518560 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
TTC1-202ENST00000518560 FCHSD2O94868 740 aa12.84□□□□□ -0.35
TTC1-202ENST00000518560 C1QTNF8P60827 252 aa12.84□□□□□ -0.35
TTC1-202ENST00000518560 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
TTC1-202ENST00000518560 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
TTC1-202ENST00000518560 STARD3NLO95772 234 aa12.83□□□□□ -0.36
TTC1-202ENST00000518560 EIF5P55010 431 aaKnown RBP12.83□□□□□ -0.36
TTC1-202ENST00000518560 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
TTC1-202ENST00000518560 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
TTC1-202ENST00000518560 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
TTC1-202ENST00000518560 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
TTC1-202ENST00000518560 SENP3-EIF4A1A0A087X0R7 540 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 MFSD10Q14728 455 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
TTC1-202ENST00000518560 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms