RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 NPDC1Q9NQX5 325 aaPredicted RBP8.06□□□□□ -1.12
LINC00535-202ENST00000517785 PIM2Q9P1W9 311 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 CYP27B1O15528 508 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 LBX1P52954 281 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 TMF1P82094 1093 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 RRS1Q15050 365 aaKnown RBP8.05□□□□□ -1.12
LINC00535-202ENST00000517785 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
LINC00535-202ENST00000517785 MTRQ99707 1265 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 PARP3Q9Y6F1 533 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
LINC00535-202ENST00000517785 EDC4Q6P2E9 1401 aaKnown RBP8.04□□□□□ -1.12
LINC00535-202ENST00000517785 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
LINC00535-202ENST00000517785 CTCFP49711 727 aaPredicted RBP8.04□□□□□ -1.12
LINC00535-202ENST00000517785 AIDAQ96BJ3 306 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 SLC12A5Q9H2X9 1139 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 ASAP1Q9ULH1 1129 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 A0A1W2PP64 1363 aa8.04□□□□□ -1.12
LINC00535-202ENST00000517785 GYS1P13807 737 aa8.03□□□□□ -1.12
LINC00535-202ENST00000517785 HMGB2P26583 209 aaKnown RBP8.03□□□□□ -1.12
LINC00535-202ENST00000517785 MLLT1Q03111 559 aaPredicted RBP8.03□□□□□ -1.12
LINC00535-202ENST00000517785 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
LINC00535-202ENST00000517785 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
LINC00535-202ENST00000517785 IL21Q9HBE4 155 aa8.03□□□□□ -1.12
LINC00535-202ENST00000517785 CGNL1Q0VF96 1302 aa8.03□□□□□ -1.12
LINC00535-202ENST00000517785 ROCK2O75116 1388 aaKnown RBP8.02□□□□□ -1.13
LINC00535-202ENST00000517785 CNTNAP1P78357 1384 aa8.02□□□□□ -1.13
LINC00535-202ENST00000517785 GLTPD2A6NH11 291 aa8.02□□□□□ -1.13
LINC00535-202ENST00000517785 RNF40O75150 1001 aa8.02□□□□□ -1.13
LINC00535-202ENST00000517785 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
LINC00535-202ENST00000517785 COG3Q96JB2 828 aa8.02□□□□□ -1.13
LINC00535-202ENST00000517785 RTCBQ9Y3I0 505 aaKnown RBP8.02□□□□□ -1.13
LINC00535-202ENST00000517785 MYH14Q7Z406 1995 aaKnown RBP8.02□□□□□ -1.13
LINC00535-202ENST00000517785 SMG6Q86US8 1419 aaKnown RBP8.02□□□□□ -1.13
LINC00535-202ENST00000517785 POTECB2RU33 542 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 RFC4P35249 363 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 VEGFBP49765 207 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 DDR1Q08345 913 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 SWT1Q5T5J6 900 aaKnown RBP8.01□□□□□ -1.13
LINC00535-202ENST00000517785 Q6ZNB5 142 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 ZNF516Q92618 1163 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 TMOD3Q9NYL9 352 aa8.01□□□□□ -1.13
LINC00535-202ENST00000517785 SRP68Q9UHB9 627 aaKnown RBP8.01□□□□□ -1.13
LINC00535-202ENST00000517785 VIRMAQ69YN4 1812 aaKnown RBP8.01□□□□□ -1.13
LINC00535-202ENST00000517785 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
LINC00535-202ENST00000517785 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
LINC00535-202ENST00000517785 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
LINC00535-202ENST00000517785 PPP1R18Q6NYC8 613 aa8□□□□□ -1.13
LINC00535-202ENST00000517785 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
LINC00535-202ENST00000517785 ATG3Q9NT62 314 aa8□□□□□ -1.13
LINC00535-202ENST00000517785 KDM6AO15550 1401 aaPredicted RBP8□□□□□ -1.13
LINC00535-202ENST00000517785 RTL1A6NKG5 1358 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 LMNB1P20700 586 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 COL5A3P25940 1745 aaPredicted RBP7.99□□□□□ -1.13
LINC00535-202ENST00000517785 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 L3MBTL2Q969R5 705 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 SLC4A9Q96Q91 983 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 EYA1Q99502 592 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 TERF2IPQ9NYB0 399 aa7.99□□□□□ -1.13
LINC00535-202ENST00000517785 ZC3H4Q9UPT8 1303 aaKnown RBP7.99□□□□□ -1.13
LINC00535-202ENST00000517785 KDRP35968 1356 aa7.98□□□□□ -1.13
LINC00535-202ENST00000517785 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
LINC00535-202ENST00000517785 GGNBP2Q9H3C7 697 aa7.98□□□□□ -1.13
LINC00535-202ENST00000517785 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
LINC00535-202ENST00000517785 NFKBIEO00221 500 aa7.97□□□□□ -1.13
LINC00535-202ENST00000517785 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
LINC00535-202ENST00000517785 PRKD2Q9BZL6 878 aa7.97□□□□□ -1.13
LINC00535-202ENST00000517785 DICER1Q9UPY3 1922 aaKnown RBP7.96□□□□□ -1.13
LINC00535-202ENST00000517785 POLRMTO00411 1230 aaKnown RBP7.96□□□□□ -1.14
LINC00535-202ENST00000517785 RPS6KA4O75676 772 aa7.96□□□□□ -1.14
LINC00535-202ENST00000517785 LAPTM4AQ15012 233 aa7.96□□□□□ -1.14
LINC00535-202ENST00000517785 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.96□□□□□ -1.14
LINC00535-202ENST00000517785 DLEC1Q9Y238 1755 aa7.96□□□□□ -1.14
LINC00535-202ENST00000517785 CNTNAP4Q9C0A0 1308 aa7.96□□□□□ -1.14
LINC00535-202ENST00000517785 INSRP06213 1382 aa7.96□□□□□ -1.14
LINC00535-202ENST00000517785 CASP8AP2Q9UKL3 1982 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 GFRA3O60609 400 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 DDNO94850 711 aaPredicted RBP7.95□□□□□ -1.14
LINC00535-202ENST00000517785 RGS19P49795 217 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 COPS2P61201 443 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 GRM1Q13255 1194 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 NKX2-3Q8TAU0 364 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 PASKQ96RG2 1323 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 USP42Q9H9J4 1324 aaKnown RBP7.95□□□□□ -1.14
LINC00535-202ENST00000517785 FLT4P35916 1363 aa7.95□□□□□ -1.14
LINC00535-202ENST00000517785 CACNA1SQ13698 1873 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 TMEM88BA6NKF7 163 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 PHKG2P15735 406 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 PTGDRQ13258 359 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 ERFEQ4G0M1 354 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 EAPPQ56P03 285 aaPredicted RBP7.94□□□□□ -1.14
LINC00535-202ENST00000517785 RC3H1Q5TC82 1133 aaKnown RBP7.94□□□□□ -1.14
LINC00535-202ENST00000517785 C2CD5Q86YS7 1000 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 TTLL6Q8N841 843 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
LINC00535-202ENST00000517785 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms