RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 A0A1W2PNR3 127 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 TCF3P15923 654 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 BICDL1Q6ZP65 573 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 FOXD3Q9UJU5 478 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-202ENST00000517533 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 EIF1AYO14602 144 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 USP5P45974 858 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 TYRO3Q06418 890 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 TSNAXIP1Q2TAA8 658 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 ARSJQ5FYB0 599 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 CSRNP1Q96S65 589 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 RUBCNLQ9H714 662 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 HCN2Q9UL51 889 aa8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 GPC6Q9Y625 555 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-202ENST00000517533 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
CTNNA1-202ENST00000517533 DAB2P98082 770 aa8.68□□□□□ -1.02
CTNNA1-202ENST00000517533 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 ARSDP51689 593 aa8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 PI16Q6UXB8 463 aa8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 PIK3R5Q8WYR1 880 aa8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-202ENST00000517533 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 SCARF1Q14162 830 aa8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 CMTR1Q8N1G2 835 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 CHMP4AQ9BY43 222 aa8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 CRISPLD1Q9H336 500 aa8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 TMEM63CQ9P1W3 806 aa8.66□□□□□ -1.02
CTNNA1-202ENST00000517533 IRS1P35568 1242 aa8.65□□□□□ -1.02
CTNNA1-202ENST00000517533 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-202ENST00000517533 DGAT1O75907 488 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 RGS20O76081 388 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 CTSHP09668 335 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 GRIN2CQ14957 1233 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 HIF1AQ16665 826 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 CTC1Q2NKJ3 1217 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 C9orf131Q5VYM1 1079 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 XKR5Q6UX68 686 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
CTNNA1-202ENST00000517533 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 AXIN1O15169 862 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 GFRA3O60609 400 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 F11P03951 625 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 PCSK2P16519 638 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 HDLBPQ00341 1268 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 CEP63Q96MT8 703 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 GAS2L1Q99501 681 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 CUEDC1Q9NWM3 386 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 FAM13BQ9NYF5 915 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
CTNNA1-202ENST00000517533 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 PSMD2Q13200 908 aa8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 ELP3Q9H9T3 547 aa8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
CTNNA1-202ENST00000517533 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 SORBS3O60504 671 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 GNA15P30679 374 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 METTL16Q86W50 562 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 NEUROD4Q9HD90 331 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
CTNNA1-202ENST00000517533 XYLBO75191 536 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 C1orf127Q8N9H9 656 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 CCDC74AQ96AQ1 378 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
CTNNA1-202ENST00000517533 EREGO14944 169 aa8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 EGFRP00533 1210 aa8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 CYP2E1P05181 493 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 RPLP1P05386 114 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.033e-8■■■■□ 25.8
CTNNA1-202ENST00000517533 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
CTNNA1-202ENST00000517533 VTI1BQ9UEU0 232 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms