RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 RGL2O15211 777 aa9.66□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NIM1KQ8IY84 436 aa9.66□□□□□ -0.86
TNFRSF11B-202ENST00000517352 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
TNFRSF11B-202ENST00000517352 GPC2Q8N158 579 aa9.66□□□□□ -0.86
TNFRSF11B-202ENST00000517352 TNRC6CQ9HCJ0 1690 aaKnown RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 RNF123Q5XPI4 1314 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 POTECB2RU33 542 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NBPF26B4DH59 902 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 CTCFP49711 727 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 LMOD3Q0VAK6 560 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NFE2L2Q16236 605 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 DEFB115Q30KQ5 88 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NBPF15Q8N660 670 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 SUPT20HQ8NEM7 779 aa9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
TNFRSF11B-202ENST00000517352 WDR90Q96KV7 1748 aa9.65□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PPIP5K2O43314 1243 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 RIPK4P57078 832 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 NEUROD2Q15784 382 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PARP10Q53GL7 1025 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 OLFM4Q6UX06 510 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 THUMPD2Q9BTF0 503 aaKnown RBP9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ZNF541Q9H0D2 1346 aa9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 KLRG2A4D1S0 409 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ECE1P42892 770 aa9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 TTLL7Q6ZT98 887 aa9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PSMD1Q99460 953 aa9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 COL3A1P02461 1466 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF11B-202ENST00000517352 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PCNTO95613 3336 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 G3V3G9 751 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 VEGFBP49765 207 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 SUSD4Q5VX71 490 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 TRMT112Q9UI30 125 aaKnown RBP9.62□□□□□ -0.87
TNFRSF11B-202ENST00000517352 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 FZD9O00144 591 aa9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 CFAP44Q96MT7 982 aa9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
TNFRSF11B-202ENST00000517352 FOXN1O15353 648 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 BBOX1O75936 387 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 HOXA10P31260 410 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 LBX1P52954 281 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 TNIP1Q15025 636 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 CRY2Q49AN0 593 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 MPNDQ8N594 471 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ZNF408Q9H9D4 720 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ZNRF3Q9ULT6 936 aa9.6□□□□□ -0.87
TNFRSF11B-202ENST00000517352 NRXN2Q9P2S2 1712 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 WDR33Q9C0J8 1336 aaKnown RBP9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ADAMTS7Q9UKP4 1686 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 H7C1D1 291 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 RALBP1Q15311 655 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 AOC3Q16853 763 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ADARB2Q9NS39 739 aaKnown RBP9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 ATP6V0A2Q9Y487 856 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 UBR2Q8IWV8 1755 aa9.59□□□□□ -0.87
TNFRSF11B-202ENST00000517352 PASKQ96RG2 1323 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 C6orf229H3BNL8 230 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 HCLS1P14317 486 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 HSP90B1P14625 803 aaKnown RBP9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 EPS15P42566 896 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CIAPIN1Q6FI81 312 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 XAGE3Q8WTP9 111 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GPR101Q96P66 508 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 TIAM2Q8IVF5 1701 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
TNFRSF11B-202ENST00000517352 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms