RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 SLC27A3Q5K4L6 730 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 TRIM67Q6ZTA4 783 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 NT5DC4Q86YG4 428 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 TMEM87AQ8NBN3 555 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 RNF217Q8TC41 542 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 GPR152Q8TDT2 470 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 RNF34Q969K3 372 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 ARMC5Q96C12 935 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 FAM161BQ96MY7 647 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 SETDB2Q96T68 719 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 GGNBP2Q9H3C7 697 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 A0A1B0GTH6 734 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 TTC24A2A3L6 582 aaPredicted RBP5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 CTSHP09668 335 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 VEGFBP49765 207 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 IDH3AP50213 366 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 ST13P50502 369 aaKnown RBP5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 TYRO3Q06418 890 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 FOXC1Q12948 553 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 SAMD5Q5TGI4 173 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 GMLQ99445 158 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 CRISPLD1Q9H336 500 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 C12orf49Q9H741 205 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZNF395Q9H8N7 513 aaPredicted RBP5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 NLRP2Q9NX02 1062 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 FNDC3AQ9Y2H6 1198 aaKnown RBP5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 KCNMB2Q9Y691 235 aa5.26□□□□□ -1.57
RNU6-840P-201ENST00000517275 TRIP4Q15650 581 aaPredicted RBP5.25□□□□□ -1.57
RNU6-840P-201ENST00000517275 BTLAQ7Z6A9 289 aa5.25□□□□□ -1.57
RNU6-840P-201ENST00000517275 ANKRD24Q8TF21 1146 aa5.25□□□□□ -1.57
RNU6-840P-201ENST00000517275 INSM2Q96T92 566 aaPredicted RBP5.25□□□□□ -1.57
RNU6-840P-201ENST00000517275 EPB42P16452 691 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 EIF4BP23588 611 aaKnown RBP5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 GRNP28799 593 aaKnown RBP5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 CTSOP43234 321 aaPredicted RBP5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 KCNQ4P56696 695 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 MMRN1Q13201 1228 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZNF280CQ8ND82 737 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 HPS1Q92902 700 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 FAM8A1Q9UBU6 413 aa5.24□□□□□ -1.57
RNU6-840P-201ENST00000517275 UPP2O95045 317 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 AVPP01185 164 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 LBRQ14739 615 aaKnown RBP5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 LYSMD3Q7Z3D4 306 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 TTC16Q8NEE8 873 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 CCDC74AQ96AQ1 378 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 KLRG1Q96E93 195 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 HSH2DQ96JZ2 352 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZIC5Q96T25 663 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 CCSER2Q9H7U1 834 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZFYVE28Q9HCC9 887 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 RTCBQ9Y3I0 505 aaKnown RBP5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 USP31Q70CQ4 1352 aa5.23□□□□□ -1.57
RNU6-840P-201ENST00000517275 CAPN5O15484 640 aaPredicted RBP5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 HOXD8P13378 290 aaPredicted RBP5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 C8orf34Q49A92 452 aa5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZNF438Q7Z4V0 828 aa5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 NLRP8Q86W28 1048 aa5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 GALNT12Q8IXK2 581 aa5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 CHRDQ9H2X0 955 aa5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 POLMQ9NP87 494 aaPredicted RBP5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 FOXD3Q9UJU5 478 aaPredicted RBP5.22□□□□□ -1.57
RNU6-840P-201ENST00000517275 A6NHS1 94 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 TNFRSF10AO00220 468 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 FAM157BP0CG42 384 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 MSX1P28360 303 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 GJA8P48165 433 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 SMCPP49901 116 aaPredicted RBP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 PRPF40BQ6NWY9 871 aaKnown RBP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 MRPL14Q6P1L8 145 aaKnown RBP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 ERMP1Q7Z2K6 904 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 PMEPA1Q969W9 287 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 OSBPL7Q9BZF2 842 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 ELP3Q9H9T3 547 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 PLA2G2EQ9NZK7 142 aa5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 DDX41Q9UJV9 622 aaKnown RBP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 SOS2Q07890 1332 aaPredicted RBP5.21□□□□□ -1.58
RNU6-840P-201ENST00000517275 UBAP1LF5GYI3 381 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 PHACTR2O75167 634 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 RGS20O76081 388 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 CANXP27824 592 aaKnown RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 POU4F2Q12837 409 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 GNL2Q13823 731 aaKnown RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 USPL1Q5W0Q7 1092 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 BICDL1Q6ZP65 573 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 HS2ST1Q7LGA3 356 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 ZNF654Q8IZM8 581 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 CRIPAKQ8N1N5 446 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 NOC4LQ9BVI4 516 aaKnown RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 SUV39H2Q9H5I1 410 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 EFCC1Q9HA90 598 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 SRA1Q9HD15 236 aaKnown RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 TIMMDC1Q9NPL8 285 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 CUEDC1Q9NWM3 386 aaPredicted RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 ABI2Q9NYB9 513 aaPredicted RBP5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 TMEM63CQ9P1W3 806 aa5.2□□□□□ -1.58
RNU6-840P-201ENST00000517275 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms