RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 SHISA4Q96DD7 197 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 HHIPQ96QV1 700 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 STRN4Q9NRL3 753 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DAXXQ9UER7 740 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 HCN2Q9UL51 889 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SMG5Q9UPR3 1016 aaKnown RBP0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PCDHGC4Q9Y5F7 938 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZBTB42B2RXF5 422 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PPFIA2O75334 1257 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ALX3O95076 343 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 OATP04181 439 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 RNASE1P07998 156 aaKnown RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MAPTP10636 758 aaKnown RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 HOXD8P13378 290 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GLB1P16278 677 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ADH7P40394 386 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MAGEA10P43363 369 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ADAM17P78536 824 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 KCNMB1Q16558 191 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FAM161AQ3B820 660 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 EPHA10Q5JZY3 1008 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SLC27A3Q5K4L6 730 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZNF362Q5T0B9 420 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LCE1CQ5T751 118 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LCE1BQ5T7P3 118 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CRIP3Q6Q6R5 217 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PRR23BQ6ZRT6 265 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SYT9Q86SS6 491 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 IFNLR1Q8IU57 520 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 WFDC3Q8IUB2 231 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LRRN4CLQ8ND94 238 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GIMAP7Q8NHV1 300 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LIN37Q96GY3 246 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FAM83CQ9BQN1 747 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 BDH2Q9BUT1 245 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GRIP2Q9C0E4 1043 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MRPL18Q9H0U6 180 aaKnown RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CRISPLD1Q9H336 500 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 RUBCNLQ9H714 662 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ATG3Q9NT62 314 aa0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DNAAF2Q9NVR5 837 aaKnown RBP0.42□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZC3H12DA2A288 527 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 K7ESM1 405 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DLL1O00548 723 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LILRA1O75019 489 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ADD1P35611 737 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 USP46P62068 366 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TNP2Q05952 138 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 INTS6LQ5JSJ4 861 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TCERG1LQ5VWI1 586 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DPY19L2P1Q6NXN4 242 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 NLRP8Q86W28 1048 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CLEC10AQ8IUN9 316 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DNAJC10Q8IXB1 793 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DMRTC2Q8IXT2 367 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 STK11IPQ8N1F8 1099 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZNF784Q8NCA9 323 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 WASF1Q92558 559 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 UTP4Q969X6 686 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 COL26A1Q96A83 441 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 UBL7Q96S82 380 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZCCHC2Q9C0B9 1178 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 KCNK12Q9HB15 430 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MBNL3Q9NUK0 354 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CDV3Q9UKY7 258 aaKnown RBP0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SLC5A6Q9Y289 635 aa0.41□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MUC19Q7Z5P9 8384 aa0.4□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DCDC2BA2VCK2 349 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 MEN1O00255 615 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ETV2O00321 342 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ATXN7O15265 892 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KDM4AO75164 1064 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 FAM157BP0CG42 384 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 SRFP11831 508 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 MSX1P28360 303 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 AFF1P51825 1210 aaKnown RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KRTAP10-1P60331 282 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KRTAP10-8P60410 259 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 TGFB2P61812 414 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KLF10Q13118 480 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 PTGDRQ13258 359 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ZNF574Q6ZN55 896 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 METTL3Q86U44 580 aaKnown RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ZDHHC14Q8IZN3 488 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 BCL7CQ8WUZ0 217 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 SYMPKQ92797 1274 aaKnown RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 HLA-CQ95604 372 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 FAM46AQ96IP4 442 aaKnown RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 MFSD14AQ96MC6 490 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KCTD15Q96SI1 283 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 METTL22Q9BUU2 404 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 OSBPL1AQ9BXW6 950 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 CEP41Q9BYV8 373 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 JPH1Q9HDC5 661 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 RYDENQ9NUL5 291 aaKnown RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 CRIM1Q9NZV1 1036 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ING1Q9UK53 422 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 ADAMTS6Q9UKP5 1117 aa0.4□□□□□ -2.35
RNU6-1238P-201ENST00000517215 WDR33Q9C0J8 1336 aaKnown RBP0.39□□□□□ -2.35
RNU6-1238P-201ENST00000517215 KRTAP4-16G5E9R7 235 aaPredicted RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms