RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-224	ENST00000515316	CCDC191	Q8NCU4	936 aa		32.18	■■■□□ 2.74
SPOCK3-224	ENST00000515316	BCL2L13	Q9BXK5	485 aa		32.18	■■■□□ 2.74
SPOCK3-224	ENST00000515316		H0YIN7	160 aa		32.17	■■■□□ 2.74
SPOCK3-224	ENST00000515316	ERFE	Q4G0M1	354 aa		32.17	■■■□□ 2.74
SPOCK3-224	ENST00000515316	PTPRC	P08575	1304 aa		32.17	■■■□□ 2.74
SPOCK3-224	ENST00000515316	BRPF1	P55201	1214 aa	Predicted RBP	32.16	■■■□□ 2.74
SPOCK3-224	ENST00000515316	C2CD5	Q86YS7	1000 aa		32.16	■■■□□ 2.74
SPOCK3-224	ENST00000515316	YTHDC1	Q96MU7	727 aa	Known RBP	32.15	■■■□□ 2.74
SPOCK3-224	ENST00000515316	CWC25	Q9NXE8	425 aa	Predicted RBP	32.15	■■■□□ 2.74
SPOCK3-224	ENST00000515316	PXDNL	A1KZ92	1463 aa		32.15	■■■□□ 2.74
SPOCK3-224	ENST00000515316	CHRNA5	P30532	468 aa		32.14	■■■□□ 2.74
SPOCK3-224	ENST00000515316	SLC10A5	Q5PT55	438 aa		32.14	■■■□□ 2.74
SPOCK3-224	ENST00000515316	SH3TC1	Q8TE82	1336 aa		32.14	■■■□□ 2.74
SPOCK3-224	ENST00000515316	PIM2	Q9P1W9	311 aa		32.13	■■■□□ 2.73
SPOCK3-224	ENST00000515316		F6X3S4	739 aa		32.12	■■■□□ 2.73
SPOCK3-224	ENST00000515316	IGKV5-2	P06315	115 aa		32.12	■■■□□ 2.73
SPOCK3-224	ENST00000515316	KCNA3	P22001	575 aa		32.12	■■■□□ 2.73
SPOCK3-224	ENST00000515316	LINS1	Q8NG48	757 aa		32.12	■■■□□ 2.73
SPOCK3-224	ENST00000515316	KLRG2	A4D1S0	409 aa	Predicted RBP	32.11	■■■□□ 2.73
SPOCK3-224	ENST00000515316	GPR162	Q16538	588 aa		32.11	■■■□□ 2.73
SPOCK3-224	ENST00000515316	NEURL1B	A8MQ27	555 aa		32.1	■■■□□ 2.73
SPOCK3-224	ENST00000515316	HSP90B1	P14625	803 aa	Known RBP	32.1	■■■□□ 2.73
SPOCK3-224	ENST00000515316	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.1	■■■□□ 2.73
SPOCK3-224	ENST00000515316	NLRP3	Q96P20	1036 aa		32.1	■■■□□ 2.73
SPOCK3-224	ENST00000515316	PELP1	Q8IZL8	1130 aa	Known RBP	32.09	■■■□□ 2.73
SPOCK3-224	ENST00000515316	FAM89A	Q96GI7	184 aa		32.09	■■■□□ 2.73
SPOCK3-224	ENST00000515316	NOB1	Q9ULX3	412 aa	Known RBP	32.09	■■■□□ 2.73
SPOCK3-224	ENST00000515316	ABCC12	Q96J65	1359 aa		32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	PCCA	P05165	728 aa	Predicted RBP	32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	SRGN	P10124	158 aa		32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	CWF19L2	Q2TBE0	894 aa	Known RBP	32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	RIC1	Q4ADV7	1423 aa		32.08	■■■□□ 2.73
SPOCK3-224	ENST00000515316	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	KIF16B	Q96L93	1317 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	BEND3	Q5T5X7	828 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	STYK1	Q6J9G0	422 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	SLC4A10	Q6U841	1118 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	MASTL	Q96GX5	879 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	ANKRD31	Q8N7Z5	1873 aa		32.07	■■■□□ 2.72
SPOCK3-224	ENST00000515316	KIAA1551	Q9HCM1	1747 aa		32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	IPO8	O15397	1037 aa	Known RBP	32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	NPR1	P16066	1061 aa		32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	DALRD3	Q5D0E6	543 aa	Known RBP	32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	SYNE4	Q8N205	404 aa		32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	ARHGAP45	Q92619	1136 aa		32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	API5	Q9BZZ5	524 aa	Known RBP	32.06	■■■□□ 2.72
SPOCK3-224	ENST00000515316	HCLS1	P14317	486 aa	Predicted RBP	32.05	■■■□□ 2.72
SPOCK3-224	ENST00000515316	GCKR	Q14397	625 aa		32.05	■■■□□ 2.72
SPOCK3-224	ENST00000515316	TTLL6	Q8N841	843 aa		32.05	■■■□□ 2.72
SPOCK3-224	ENST00000515316	IRS4	O14654	1257 aa	Predicted RBP	32.04	■■■□□ 2.72
SPOCK3-224	ENST00000515316	BCAR3	O75815	825 aa		32.04	■■■□□ 2.72
SPOCK3-224	ENST00000515316	CNKSR1	Q969H4	720 aa		32.04	■■■□□ 2.72
SPOCK3-224	ENST00000515316	SRCIN1	Q9C0H9	1055 aa		32.04	■■■□□ 2.72
SPOCK3-224	ENST00000515316	BCS1L	Q9Y276	419 aa		32.04	■■■□□ 2.72
SPOCK3-224	ENST00000515316	ALDH1L1	O75891	902 aa		32.03	■■■□□ 2.72
SPOCK3-224	ENST00000515316	CRY2	Q49AN0	593 aa		32.03	■■■□□ 2.72
SPOCK3-224	ENST00000515316	RTL5	Q5HYW3	569 aa	Predicted RBP	32.03	■■■□□ 2.72
SPOCK3-224	ENST00000515316	WWC3	Q9ULE0	1092 aa		32.03	■■■□□ 2.72
SPOCK3-224	ENST00000515316	GRIN3B	O60391	1043 aa		32.02	■■■□□ 2.72
SPOCK3-224	ENST00000515316	RPGR	Q92834	1020 aa	Known RBP	32.02	■■■□□ 2.72
SPOCK3-224	ENST00000515316		H7C1W4	665 aa		32.01	■■■□□ 2.71
SPOCK3-224	ENST00000515316	ALDH1B1	P30837	517 aa		32.01	■■■□□ 2.71
SPOCK3-224	ENST00000515316	RBM17	Q96I25	401 aa	Known RBP	32	■■■□□ 2.71
SPOCK3-224	ENST00000515316	CDHR2	Q9BYE9	1310 aa		32	■■■□□ 2.71
SPOCK3-224	ENST00000515316	YBX3	P16989	372 aa	Known RBP eCLIP	31.99	■■■□□ 2.71
SPOCK3-224	ENST00000515316	FRAT1	Q92837	279 aa	Predicted RBP	31.99	■■■□□ 2.71
SPOCK3-224	ENST00000515316	HOXA10	P31260	410 aa	Predicted RBP	31.98	■■■□□ 2.71
SPOCK3-224	ENST00000515316	JARID2	Q92833	1246 aa	Predicted RBP	31.98	■■■□□ 2.71
SPOCK3-224	ENST00000515316	PDE8A	O60658	829 aa		31.97	■■■□□ 2.71
SPOCK3-224	ENST00000515316	C3orf67	Q6ZVT6	689 aa		31.97	■■■□□ 2.71
SPOCK3-224	ENST00000515316	CCT4	P50991	539 aa	Known RBP	31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	SF3B3	Q15393	1217 aa	Known RBP	31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	UBE3B	Q7Z3V4	1068 aa		31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	CRAMP1	Q96RY5	1269 aa		31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	DLEC1	Q9Y238	1755 aa		31.96	■■■□□ 2.71
SPOCK3-224	ENST00000515316	ZKSCAN2	Q63HK3	967 aa		31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	ATF7IP	Q6VMQ6	1270 aa		31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	RCAN3	Q9UKA8	241 aa		31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	BRCA1	P38398	1863 aa	Known RBP	31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	COL11A2	P13942	1736 aa	Predicted RBP	31.94	■■■□□ 2.7
SPOCK3-224	ENST00000515316	GRM8	O00222	908 aa		31.93	■■■□□ 2.7
SPOCK3-224	ENST00000515316	DDX46	Q7L014	1031 aa	Known RBP	31.93	■■■□□ 2.7
SPOCK3-224	ENST00000515316	PRPF40B	Q6NWY9	871 aa	Known RBP	31.92	■■■□□ 2.7
SPOCK3-224	ENST00000515316	CASP7	P55210	303 aa		31.91	■■■□□ 2.7
SPOCK3-224	ENST00000515316	CCDC152	Q4G0S7	254 aa		31.9	■■■□□ 2.7
SPOCK3-224	ENST00000515316	PLA2G12B	Q9BX93	195 aa		31.9	■■■□□ 2.7
SPOCK3-224	ENST00000515316	DDX60	Q8IY21	1712 aa	Known RBP	31.89	■■■□□ 2.7
SPOCK3-224	ENST00000515316	TRIM27	P14373	513 aa		31.89	■■■□□ 2.7
SPOCK3-224	ENST00000515316	SOGA3	Q5TF21	947 aa		31.88	■■■□□ 2.69
SPOCK3-224	ENST00000515316	ARHGAP27	Q6ZUM4	889 aa		31.88	■■■□□ 2.69
SPOCK3-224	ENST00000515316	C21orf2	O43822	256 aa		31.87	■■■□□ 2.69
SPOCK3-224	ENST00000515316	BBOX1	O75936	387 aa		31.87	■■■□□ 2.69
SPOCK3-224	ENST00000515316	CTSW	P56202	376 aa		31.87	■■■□□ 2.69
SPOCK3-224	ENST00000515316	UTY	O14607	1347 aa		31.86	■■■□□ 2.69
SPOCK3-224	ENST00000515316	ABCC4	O15439	1325 aa		31.86	■■■□□ 2.69
SPOCK3-224	ENST00000515316	INTS3	Q68E01	1043 aa	Known RBP	31.86	■■■□□ 2.69
SPOCK3-224	ENST00000515316	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.86	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms