RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF25-220ENST00000515145 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
TNFRSF25-220ENST00000515145 PPP1R42Q7Z4L9 355 aa21.37■■□□□ 1.01
TNFRSF25-220ENST00000515145 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
TNFRSF25-220ENST00000515145 HOXB7P09629 217 aa21.36■■□□□ 1.01
TNFRSF25-220ENST00000515145 C3orf67Q6ZVT6 689 aa21.36■■□□□ 1.01
TNFRSF25-220ENST00000515145 RPGRQ92834 1020 aaKnown RBP21.36■■□□□ 1.01
TNFRSF25-220ENST00000515145 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
TNFRSF25-220ENST00000515145 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF25-220ENST00000515145 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF25-220ENST00000515145 AIMP1Q12904 312 aaKnown RBP21.35■■□□□ 1.01
TNFRSF25-220ENST00000515145 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
TNFRSF25-220ENST00000515145 UTP14AQ9BVJ6 771 aaKnown RBP21.35■■□□□ 1.01
TNFRSF25-220ENST00000515145 CHPF2Q9P2E5 772 aa21.35■■□□□ 1.01
TNFRSF25-220ENST00000515145 APAF1O14727 1248 aa21.34■■□□□ 1.01
TNFRSF25-220ENST00000515145 HSP90AB3PQ58FF7 597 aa21.34■■□□□ 1.01
TNFRSF25-220ENST00000515145 MBIPQ9NS73 344 aa21.34■■□□□ 1.01
TNFRSF25-220ENST00000515145 RNF123Q5XPI4 1314 aa21.33■■□□□ 1.01
TNFRSF25-220ENST00000515145 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
TNFRSF25-220ENST00000515145 HTRA3P83110 453 aa21.33■■□□□ 1.01
TNFRSF25-220ENST00000515145 CRAMP1Q96RY5 1269 aa21.33■■□□□ 1.01
TNFRSF25-220ENST00000515145 PSMD1Q99460 953 aa21.33■■□□□ 1.01
TNFRSF25-220ENST00000515145 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 IARSP41252 1262 aaKnown RBP21.32■■□□□ 1
TNFRSF25-220ENST00000515145 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 COL13A1Q5TAT6 717 aaPredicted RBP21.32■■□□□ 1
TNFRSF25-220ENST00000515145 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 SLC51AQ86UW1 340 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 NLRP10Q86W26 655 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 SYNE4Q8N205 404 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 KLRG1Q96E93 195 aa21.32■■□□□ 1
TNFRSF25-220ENST00000515145 RBM17Q96I25 401 aaKnown RBP21.32■■□□□ 1
TNFRSF25-220ENST00000515145 LAMB2P55268 1798 aa21.31■■□□□ 1
TNFRSF25-220ENST00000515145 PPEF1O14829 653 aaPredicted RBP21.31■■□□□ 1
TNFRSF25-220ENST00000515145 TCIRG1Q13488 830 aa21.31■■□□□ 1
TNFRSF25-220ENST00000515145 DUSP27Q5VZP5 1158 aa21.31■■□□□ 1
TNFRSF25-220ENST00000515145 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
TNFRSF25-220ENST00000515145 NLRP3Q96P20 1036 aa21.31■■□□□ 1
TNFRSF25-220ENST00000515145 IFT57Q9NWB7 429 aa21.3■■□□□ 1
TNFRSF25-220ENST00000515145 DBF4Q9UBU7 674 aaPredicted RBP21.3■■□□□ 1
TNFRSF25-220ENST00000515145 COL4A5P29400 1685 aa21.3■■□□□ 1
TNFRSF25-220ENST00000515145 SCN4AP35499 1836 aa21.29■■□□□ 1
TNFRSF25-220ENST00000515145 CAPN15O75808 1086 aa21.29■■□□□ 1
TNFRSF25-220ENST00000515145 JMYQ8N9B5 988 aa21.29■■□□□ 1
TNFRSF25-220ENST00000515145 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
TNFRSF25-220ENST00000515145 FZD9O00144 591 aa21.28■■□□□ 1
TNFRSF25-220ENST00000515145 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
TNFRSF25-220ENST00000515145 GNAI1P63096 354 aa21.28■■□□□ 1
TNFRSF25-220ENST00000515145 CCDC184Q52MB2 194 aa21.28■■□□□ 1
TNFRSF25-220ENST00000515145 ABCC4O15439 1325 aa21.28■■□□□ 1
TNFRSF25-220ENST00000515145 IQCA1LA6NCM1 817 aa21.27■■□□□ 1
TNFRSF25-220ENST00000515145 POTEIP0CG38 1075 aa21.27■■□□□ 1
TNFRSF25-220ENST00000515145 POTEJP0CG39 1038 aa21.27■■□□□ 1
TNFRSF25-220ENST00000515145 CALD1Q05682 793 aaKnown RBP21.27■■□□□ 1
TNFRSF25-220ENST00000515145 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
TNFRSF25-220ENST00000515145 TRMT112Q9UI30 125 aaKnown RBP21.27■■□□□ 1
TNFRSF25-220ENST00000515145 SH3TC1Q8TE82 1336 aa21.27■□□□□ 0.99
TNFRSF25-220ENST00000515145 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF25-220ENST00000515145 HYPKQ9NX55 129 aa21.26■□□□□ 0.99
TNFRSF25-220ENST00000515145 TCERG1O14776 1098 aaKnown RBP21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 TAF1DQ9H5J8 278 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 ATP6V0A2Q9Y487 856 aa21.25■□□□□ 0.99
TNFRSF25-220ENST00000515145 DDX60Q8IY21 1712 aaKnown RBP21.24■□□□□ 0.99
TNFRSF25-220ENST00000515145 JDP2Q8WYK2 163 aa21.24■□□□□ 0.99
TNFRSF25-220ENST00000515145 TNS4Q8IZW8 715 aa21.23■□□□□ 0.99
TNFRSF25-220ENST00000515145 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
TNFRSF25-220ENST00000515145 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
TNFRSF25-220ENST00000515145 PCNTO95613 3336 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 ATP5J2-PTCD1G3V325 749 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 LDHDQ86WU2 507 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 GPC2Q8N158 579 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 LARGE2Q8N3Y3 721 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 HACL1Q9UJ83 578 aa21.22■□□□□ 0.99
TNFRSF25-220ENST00000515145 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF25-220ENST00000515145 C8orf58Q8NAV2 365 aa21.21■□□□□ 0.99
TNFRSF25-220ENST00000515145 BBOX1O75936 387 aa21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 EIF6P56537 245 aaKnown RBP21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 GRAPQ13588 217 aa21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 GRAPLQ8TC17 118 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 TAF1P21675 1872 aa21.2■□□□□ 0.98
TNFRSF25-220ENST00000515145 LRRC37AA6NMS7 1700 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 LTBP1Q14766 1721 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 PPIP5K2O43314 1243 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 EPHX2P34913 555 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 TRIM28Q13263 835 aaKnown RBP21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 SP8Q8IXZ3 490 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 FAM89AQ96GI7 184 aa21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 TMX4Q9H1E5 349 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF25-220ENST00000515145 AOC3Q16853 763 aa21.18■□□□□ 0.98
TNFRSF25-220ENST00000515145 EAPPQ56P03 285 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF25-220ENST00000515145 NIM1KQ8IY84 436 aa21.18■□□□□ 0.98
TNFRSF25-220ENST00000515145 DUOX1Q9NRD9 1551 aa21.18■□□□□ 0.98
TNFRSF25-220ENST00000515145 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms