RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 TCIRG1Q13488 830 aa18■□□□□ 0.47
ITGA3-214ENST00000514834 CRY2Q49AN0 593 aa18■□□□□ 0.47
ITGA3-214ENST00000514834 NLRP10Q86W26 655 aa18■□□□□ 0.47
ITGA3-214ENST00000514834 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
ITGA3-214ENST00000514834 PHAXQ9H814 394 aaKnown RBP18■□□□□ 0.47
ITGA3-214ENST00000514834 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
ITGA3-214ENST00000514834 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
ITGA3-214ENST00000514834 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
ITGA3-214ENST00000514834 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
ITGA3-214ENST00000514834 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
ITGA3-214ENST00000514834 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
ITGA3-214ENST00000514834 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
ITGA3-214ENST00000514834 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
ITGA3-214ENST00000514834 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
ITGA3-214ENST00000514834 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
ITGA3-214ENST00000514834 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
ITGA3-214ENST00000514834 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
ITGA3-214ENST00000514834 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
ITGA3-214ENST00000514834 LAMB2P55268 1798 aa17.96■□□□□ 0.47
ITGA3-214ENST00000514834 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
ITGA3-214ENST00000514834 HOXA10P31260 410 aaPredicted RBP17.96■□□□□ 0.47
ITGA3-214ENST00000514834 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
ITGA3-214ENST00000514834 HSP90AB3PQ58FF7 597 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 ISCA1Q9BUE6 129 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 TAOK3Q9H2K8 898 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 RRAGCQ9HB90 399 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
ITGA3-214ENST00000514834 IL16Q14005 1332 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 LTBP3Q9NS15 1303 aa17.95■□□□□ 0.46
ITGA3-214ENST00000514834 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
ITGA3-214ENST00000514834 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
ITGA3-214ENST00000514834 CCDC93Q567U6 631 aa17.94■□□□□ 0.46
ITGA3-214ENST00000514834 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
ITGA3-214ENST00000514834 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
ITGA3-214ENST00000514834 TAF1P21675 1872 aa17.94■□□□□ 0.46
ITGA3-214ENST00000514834 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
ITGA3-214ENST00000514834 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
ITGA3-214ENST00000514834 NLRP3Q96P20 1036 aa17.93■□□□□ 0.46
ITGA3-214ENST00000514834 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
ITGA3-214ENST00000514834 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
ITGA3-214ENST00000514834 DDX60Q8IY21 1712 aaKnown RBP17.92■□□□□ 0.46
ITGA3-214ENST00000514834 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
ITGA3-214ENST00000514834 SOGA3Q5TF21 947 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 CCDC30Q5VVM6 783 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 G2E3Q7L622 706 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
ITGA3-214ENST00000514834 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
ITGA3-214ENST00000514834 FKBP4Q02790 459 aaKnown RBP eCLIP17.91■□□□□ 0.46
ITGA3-214ENST00000514834 TWISTNBQ3B726 338 aaPredicted RBP17.91■□□□□ 0.46
ITGA3-214ENST00000514834 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
ITGA3-214ENST00000514834 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
ITGA3-214ENST00000514834 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
ITGA3-214ENST00000514834 POTECB2RU33 542 aa17.9■□□□□ 0.46
ITGA3-214ENST00000514834 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
ITGA3-214ENST00000514834 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
ITGA3-214ENST00000514834 MYD88Q99836 296 aa17.9■□□□□ 0.46
ITGA3-214ENST00000514834 RNF123Q5XPI4 1314 aa17.9■□□□□ 0.46
ITGA3-214ENST00000514834 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
ITGA3-214ENST00000514834 COL4A1P02462 1669 aa17.9■□□□□ 0.46
ITGA3-214ENST00000514834 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
ITGA3-214ENST00000514834 TRIM28Q13263 835 aaKnown RBP17.89■□□□□ 0.45
ITGA3-214ENST00000514834 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
ITGA3-214ENST00000514834 ABCC4O15439 1325 aa17.89■□□□□ 0.45
ITGA3-214ENST00000514834 COL4A5P29400 1685 aa17.88■□□□□ 0.45
ITGA3-214ENST00000514834 PPEF1O14829 653 aaPredicted RBP17.88■□□□□ 0.45
ITGA3-214ENST00000514834 TOMM70O94826 608 aa17.88■□□□□ 0.45
ITGA3-214ENST00000514834 VAMP4O75379 141 aa17.87■□□□□ 0.45
ITGA3-214ENST00000514834 DDNO94850 711 aaPredicted RBP17.87■□□□□ 0.45
ITGA3-214ENST00000514834 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
ITGA3-214ENST00000514834 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
ITGA3-214ENST00000514834 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
ITGA3-214ENST00000514834 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
ITGA3-214ENST00000514834 METTL22Q9BUU2 404 aaPredicted RBP17.86■□□□□ 0.45
ITGA3-214ENST00000514834 IRS4O14654 1257 aaPredicted RBP17.85■□□□□ 0.45
ITGA3-214ENST00000514834 IGKV5-2P06315 115 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
ITGA3-214ENST00000514834 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 ZNF521Q96K83 1311 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 PSMD1Q99460 953 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 ATP6V0A2Q9Y487 856 aa17.85■□□□□ 0.45
ITGA3-214ENST00000514834 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
ITGA3-214ENST00000514834 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
ITGA3-214ENST00000514834 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
ITGA3-214ENST00000514834 DPY19L2Q6NUT2 758 aa17.84■□□□□ 0.45
ITGA3-214ENST00000514834 ZBTB38Q8NAP3 1195 aaPredicted RBP17.84■□□□□ 0.45
ITGA3-214ENST00000514834 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 HSPA6P17066 643 aa17.83■□□□□ 0.44
ITGA3-214ENST00000514834 SF3B3Q15393 1217 aaKnown RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 MIER1Q8N108 512 aa17.83■□□□□ 0.44
ITGA3-214ENST00000514834 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 CELF1Q92879 486 aaKnown RBP17.83■□□□□ 0.44
ITGA3-214ENST00000514834 BBOX1O75936 387 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms