RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 STK31Q9BXU1 1019 aa9.11□□□□□ -0.95
SMAD1-213ENST00000514778 SPON1Q9HCB6 807 aa9.11□□□□□ -0.95
SMAD1-213ENST00000514778 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
SMAD1-213ENST00000514778 SENP3-EIF4A1A0A087X0R7 540 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 PHF14O94880 888 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 GYS1P13807 737 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 POLD1P28340 1107 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 KIF6Q6ZMV9 814 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 DZIP3Q86Y13 1208 aaKnown RBP9.1□□□□□ -0.95
SMAD1-213ENST00000514778 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 CHPF2Q9P2E5 772 aa9.1□□□□□ -0.95
SMAD1-213ENST00000514778 COL24A1Q17RW2 1714 aa9.09□□□□□ -0.95
SMAD1-213ENST00000514778 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-213ENST00000514778 CAMTA2O94983 1202 aa9.09□□□□□ -0.95
SMAD1-213ENST00000514778 DDX58O95786 925 aaKnown RBP9.09□□□□□ -0.95
SMAD1-213ENST00000514778 MYL6BP14649 208 aa9.09□□□□□ -0.95
SMAD1-213ENST00000514778 BRPF1P55201 1214 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-213ENST00000514778 CDAN1Q8IWY9 1227 aa9.09□□□□□ -0.95
SMAD1-213ENST00000514778 MYH14Q7Z406 1995 aaKnown RBP9.09□□□□□ -0.95
SMAD1-213ENST00000514778 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 TUBGCP6Q96RT7 1819 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 TM4SF1P30408 202 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 HSP90AB3PQ58FF7 597 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
SMAD1-213ENST00000514778 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 COPS6Q7L5N1 327 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 PDGFDQ9GZP0 370 aaPredicted RBP9.08□□□□□ -0.96
SMAD1-213ENST00000514778 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
SMAD1-213ENST00000514778 LRP5O75197 1615 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 STK25O00506 426 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 ZBTB7AO95365 584 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 PTGER2P43116 358 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 XAGE3Q8WTP9 111 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
SMAD1-213ENST00000514778 C4AP0C0L4 1744 aa9.07□□□□□ -0.96
SMAD1-213ENST00000514778 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
SMAD1-213ENST00000514778 PARP10Q53GL7 1025 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 KSR2Q6VAB6 950 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 TTLL7Q6ZT98 887 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 ARXQ96QS3 562 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 SETDB2Q96T68 719 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 SRP68Q9UHB9 627 aaKnown RBP9.06□□□□□ -0.96
SMAD1-213ENST00000514778 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 CARMIL3Q8ND23 1372 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 SCN7AQ01118 1682 aa9.06□□□□□ -0.96
SMAD1-213ENST00000514778 PTPRCP08575 1304 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 IBTKQ9P2D0 1353 aaPredicted RBP9.05□□□□□ -0.96
SMAD1-213ENST00000514778 MMP10P09238 476 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
SMAD1-213ENST00000514778 FLIIQ13045 1269 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 ZNF34Q8IZ26 560 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 ARHGAP45Q92619 1136 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 NYXQ9GZU5 481 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 CD2APQ9Y5K6 639 aa9.05□□□□□ -0.96
SMAD1-213ENST00000514778 BCORQ6W2J9 1755 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 POLRMTO00411 1230 aaKnown RBP9.04□□□□□ -0.96
SMAD1-213ENST00000514778 ANXA1P04083 346 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 RARSP54136 660 aaKnown RBP9.04□□□□□ -0.96
SMAD1-213ENST00000514778 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
SMAD1-213ENST00000514778 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 NFIXQ14938 502 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 HLFQ16534 295 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 TPTE2Q6XPS3 522 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
SMAD1-213ENST00000514778 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
SMAD1-213ENST00000514778 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
SMAD1-213ENST00000514778 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
SMAD1-213ENST00000514778 HSP90B1P14625 803 aaKnown RBP9.03□□□□□ -0.96
SMAD1-213ENST00000514778 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 TBC1D9BQ66K14 1250 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 CCDC191Q8NCU4 936 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
SMAD1-213ENST00000514778 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 NIP7Q9Y221 180 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMAD1-213ENST00000514778 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
SMAD1-213ENST00000514778 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 SERPINB2P05120 415 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms