RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 CPNE3O75131 537 aaKnown RBP8.06□□□□□ -1.12
RFC1-216ENST00000514572 NEFLP07196 543 aa8.06□□□□□ -1.12
RFC1-216ENST00000514572 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
RFC1-216ENST00000514572 TRIP4Q15650 581 aaPredicted RBP8.06□□□□□ -1.12
RFC1-216ENST00000514572 NBPF1Q3BBV0 1214 aa8.06□□□□□ -1.12
RFC1-216ENST00000514572 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
RFC1-216ENST00000514572 SLC43A3Q8NBI5 491 aa8.06□□□□□ -1.12
RFC1-216ENST00000514572 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
RFC1-216ENST00000514572 TNFRSF21O75509 655 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 GRNP28799 593 aaKnown RBP8.05□□□□□ -1.12
RFC1-216ENST00000514572 IDH3AP50213 366 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 C8orf34Q49A92 452 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 HSH2DQ96JZ2 352 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 KCNMB2Q9Y691 235 aa8.05□□□□□ -1.12
RFC1-216ENST00000514572 CTSOP43234 321 aaPredicted RBP8.04□□□□□ -1.12
RFC1-216ENST00000514572 PRR20EP86478 221 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PRR20CP86479 221 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PRR20DP86480 221 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PRR20BP86481 221 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PRR20AP86496 221 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
RFC1-216ENST00000514572 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 PDE12Q6L8Q7 609 aaKnown RBP8.04□□□□□ -1.12
RFC1-216ENST00000514572 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 SPG7Q9UQ90 795 aa8.04□□□□□ -1.12
RFC1-216ENST00000514572 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
RFC1-216ENST00000514572 ARSDP51689 593 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
RFC1-216ENST00000514572 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
RFC1-216ENST00000514572 CYP4X1Q8N118 509 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 RNF217Q8TC41 542 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 HPS1Q92902 700 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
RFC1-216ENST00000514572 FOXD3Q9UJU5 478 aaPredicted RBP8.03□□□□□ -1.12
RFC1-216ENST00000514572 POTECB2RU33 542 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 TNFRSF10AO00220 468 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 GIPC1O14908 333 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 TATP17735 454 aaPredicted RBP8.02□□□□□ -1.13
RFC1-216ENST00000514572 EIF4BP23588 611 aaKnown RBP8.02□□□□□ -1.13
RFC1-216ENST00000514572 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 BTLAQ7Z6A9 289 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 GMLQ99445 158 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 ACBD3Q9H3P7 528 aa8.02□□□□□ -1.13
RFC1-216ENST00000514572 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 IRS1P35568 1242 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 CHRDQ9H2X0 955 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 ANKIB1Q9P2G1 1089 aa8.01□□□□□ -1.13
RFC1-216ENST00000514572 DDX41Q9UJV9 622 aaKnown RBP8.01□□□□□ -1.13
RFC1-216ENST00000514572 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
RFC1-216ENST00000514572 PHKA2P46019 1235 aa8□□□□□ -1.13
RFC1-216ENST00000514572 TYRO3Q06418 890 aa8□□□□□ -1.13
RFC1-216ENST00000514572 PKDCCQ504Y2 493 aa8□□□□□ -1.13
RFC1-216ENST00000514572 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
RFC1-216ENST00000514572 AIDAQ96BJ3 306 aa8□□□□□ -1.13
RFC1-216ENST00000514572 SRA1Q9HD15 236 aaKnown RBP8□□□□□ -1.13
RFC1-216ENST00000514572 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
RFC1-216ENST00000514572 EPB41L3Q9Y2J2 1087 aaPredicted RBP8□□□□□ -1.13
RFC1-216ENST00000514572 USP20Q9Y2K6 914 aa8□□□□□ -1.13
RFC1-216ENST00000514572 EGFRP00533 1210 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 VEGFBP49765 207 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 RACK1P63244 317 aaKnown RBP7.99□□□□□ -1.13
RFC1-216ENST00000514572 POU4F2Q12837 409 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 FAM177A1Q8N128 213 aaPredicted RBP7.99□□□□□ -1.13
RFC1-216ENST00000514572 TTC16Q8NEE8 873 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 POLMQ9NP87 494 aaPredicted RBP7.99□□□□□ -1.13
RFC1-216ENST00000514572 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
RFC1-216ENST00000514572 FNDC3AQ9Y2H6 1198 aaKnown RBP7.99□□□□□ -1.13
RFC1-216ENST00000514572 A0A1B0GTH6 734 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 DGAT1O75907 488 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 TNNI2P48788 182 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 ST13P50502 369 aaKnown RBP7.98□□□□□ -1.13
RFC1-216ENST00000514572 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 ARMC5Q96C12 935 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 TANGO6Q9C0B7 1094 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 SRCIN1Q9C0H9 1055 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 C11orf16Q9NQ32 467 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 FAM8A1Q9UBU6 413 aa7.98□□□□□ -1.13
RFC1-216ENST00000514572 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 UBAP1LF5GYI3 381 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 MSX1P28360 303 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 MEI1Q5TIA1 1274 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 LRRC69Q6ZNQ3 347 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 ERMP1Q7Z2K6 904 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 GALNT12Q8IXK2 581 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 CRISPLD1Q9H336 500 aa7.97□□□□□ -1.13
RFC1-216ENST00000514572 CAPN5O15484 640 aaPredicted RBP7.96□□□□□ -1.14
RFC1-216ENST00000514572 PHACTR2O75167 634 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 BICDL1Q6ZP65 573 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 HS2ST1Q7LGA3 356 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 LYSMD3Q7Z3D4 306 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms