RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 ATCAYQ86WG3 371 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 FAM177A1Q8N128 213 aaPredicted RBP5.96□□□□□ -1.46
SGCB-203ENST00000514133 PGBD3Q8N328 593 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 NIF3L1Q9GZT8 377 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 QTRT2Q9H974 415 aaKnown RBP5.96□□□□□ -1.46
SGCB-203ENST00000514133 RNF19AQ9NV58 838 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 WWC3Q9ULE0 1092 aa5.96□□□□□ -1.46
SGCB-203ENST00000514133 ZBTB39O15060 712 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 SORBS3O60504 671 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 HSP90B1P14625 803 aaKnown RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 RHOQP17081 205 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 BRD2P25440 801 aaKnown RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 ITGAEP38570 1179 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 PSMA6P60900 246 aaKnown RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 KRT76Q01546 638 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 PSMD2Q13200 908 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 TLR1Q15399 786 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 DBN1Q16643 649 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 EFHC2Q5JST6 749 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 LDLRAD1Q5T700 205 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 FIGNL1Q6PIW4 674 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 RIPOR1Q6ZS17 1223 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 STAG2Q8N3U4 1231 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 ABTB2Q8N961 1025 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 UBXN4Q92575 508 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 GAS2L1Q99501 681 aaPredicted RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 NIFKQ9BYG3 293 aaKnown RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 NUCKS1Q9H1E3 243 aaKnown RBP5.95□□□□□ -1.46
SGCB-203ENST00000514133 CRISPLD1Q9H336 500 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 VTI1BQ9UEU0 232 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 LRFN2Q9ULH4 789 aa5.95□□□□□ -1.46
SGCB-203ENST00000514133 CDK2AP1O14519 115 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 GPR182O15218 404 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 MAP2K3P46734 347 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 MAP3K10Q02779 954 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 DNM1Q05193 864 aaKnown RBP5.94□□□□□ -1.46
SGCB-203ENST00000514133 KCNMA1Q12791 1236 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 MTFR1Q15390 333 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 PUS7Q96PZ0 661 aaKnown RBP5.94□□□□□ -1.46
SGCB-203ENST00000514133 SETDB2Q96T68 719 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 FAM129BQ96TA1 746 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 POLIQ9UNA4 740 aa5.94□□□□□ -1.46
SGCB-203ENST00000514133 ADAMTS2O95450 1211 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 DAB2P98082 770 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 FAM26DQ5JW98 314 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 RNFT1Q5M7Z0 435 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 TMC4Q7Z404 712 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 NLRP8Q86W28 1048 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 NT5DC4Q86YG4 428 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 SVOPQ8N4V2 548 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 PIK3R5Q8WYR1 880 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 ZDHHC3Q9NYG2 299 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 ZNF232Q9UNY5 417 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 GPC6Q9Y625 555 aaPredicted RBP5.93□□□□□ -1.46
SGCB-203ENST00000514133 USP3Q9Y6I4 520 aa5.93□□□□□ -1.46
SGCB-203ENST00000514133 PNMA6FA0A0J9YX94 578 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 SERTM1A2A2V5 107 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 IGHA2P01877 340 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 MX2P20592 715 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 NBPF1Q3BBV0 1214 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 C4orf17Q53FE4 359 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 ZNF385CQ66K41 422 aaPredicted RBP5.92□□□□□ -1.46
SGCB-203ENST00000514133 RNF34Q969K3 372 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 ALKBH8Q96BT7 664 aaKnown RBP5.92□□□□□ -1.46
SGCB-203ENST00000514133 SCARF2Q96GP6 870 aaPredicted RBP5.92□□□□□ -1.46
SGCB-203ENST00000514133 MYO19Q96H55 970 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 CUEDC1Q9NWM3 386 aaPredicted RBP5.92□□□□□ -1.46
SGCB-203ENST00000514133 ATXN7L1Q9ULK2 861 aaPredicted RBP5.92□□□□□ -1.46
SGCB-203ENST00000514133 HCN4Q9Y3Q4 1203 aa5.92□□□□□ -1.46
SGCB-203ENST00000514133 SMARCA5O60264 1052 aaPredicted RBP5.91□□□□□ -1.46
SGCB-203ENST00000514133 ARHGEF15O94989 841 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 USP5P45974 858 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 RAD51AP2Q09MP3 1159 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 DGKZQ13574 1117 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 GAS6Q14393 721 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 C11orf91Q3C1V1 193 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 SH3PXD2AQ5TCZ1 1133 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 ALG1LQ6GMV1 187 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 KANK3Q6NY19 840 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 ALDH16A1Q8IZ83 802 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 EDEM1Q92611 657 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 CABP1Q9NZU7 370 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 PARP3Q9Y6F1 533 aa5.91□□□□□ -1.46
SGCB-203ENST00000514133 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 MSX1P28360 303 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 MZF1P28698 734 aaPredicted RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 NOS2P35228 1153 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 ZNF76P36508 570 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 ZAP70P43403 619 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 FANCCQ00597 558 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 ENOX2Q16206 610 aaKnown RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 METTL16Q86W50 562 aaKnown RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 ETFBKMTQ8IXQ9 262 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 GTPBP3Q969Y2 492 aaKnown RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 TANGO6Q9C0B7 1094 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 KLK14Q9P0G3 267 aa5.9□□□□□ -1.46
SGCB-203ENST00000514133 GDF2Q9UK05 429 aaPredicted RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 IQSEC3Q9UPP2 1182 aaPredicted RBP5.9□□□□□ -1.46
SGCB-203ENST00000514133 IGF1RP08069 1367 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms