RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ZNF428Q96B54 188 aa10.53□□□□□ -0.72
NEDD4-210ENST00000513957 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
NEDD4-210ENST00000513957 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
NEDD4-210ENST00000513957 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
NEDD4-210ENST00000513957 NPHP1O15259 732 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 ABCB7O75027 752 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 DDX58O95786 925 aaKnown RBP10.52□□□□□ -0.73
NEDD4-210ENST00000513957 HLFQ16534 295 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 PROSER3Q2NL68 480 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 NBPF5PQ86XG9 351 aaPredicted RBP10.52□□□□□ -0.73
NEDD4-210ENST00000513957 ZNF34Q8IZ26 560 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 XAGE3Q8WTP9 111 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
NEDD4-210ENST00000513957 MYH3P11055 1940 aa10.52□□□□□ -0.73
NEDD4-210ENST00000513957 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
NEDD4-210ENST00000513957 DDX60Q8IY21 1712 aaKnown RBP10.51□□□□□ -0.73
NEDD4-210ENST00000513957 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
NEDD4-210ENST00000513957 POLA2Q14181 598 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 GPR162Q16538 588 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 ANKRD13DQ6ZTN6 518 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 ZBTB3Q9H5J0 574 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 PIM2Q9P1W9 311 aa10.51□□□□□ -0.73
NEDD4-210ENST00000513957 H0YIN7 160 aa10.5□□□□□ -0.73
NEDD4-210ENST00000513957 ELL2O00472 640 aaPredicted RBP10.5□□□□□ -0.73
NEDD4-210ENST00000513957 TSPYL6Q8N831 410 aa10.5□□□□□ -0.73
NEDD4-210ENST00000513957 FER1L6Q2WGJ9 1857 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 KLRG2A4D1S0 409 aaPredicted RBP10.49□□□□□ -0.73
NEDD4-210ENST00000513957 VAMP4O75379 141 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 ANXA1P04083 346 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 DPEP1P16444 411 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 KCNA3P22001 575 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 GTF2E1P29083 439 aaPredicted RBP10.49□□□□□ -0.73
NEDD4-210ENST00000513957 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
NEDD4-210ENST00000513957 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 AIMP1Q12904 312 aaKnown RBP10.49□□□□□ -0.73
NEDD4-210ENST00000513957 TRIM28Q13263 835 aaKnown RBP10.49□□□□□ -0.73
NEDD4-210ENST00000513957 TCIRG1Q13488 830 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 SBF1O95248 1867 aa10.49□□□□□ -0.73
NEDD4-210ENST00000513957 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 NTSR2O95665 410 aa10.48□□□□□ -0.73
NEDD4-210ENST00000513957 HSP90B1P14625 803 aaKnown RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 DALRD3Q5D0E6 543 aaKnown RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 STYK1Q6J9G0 422 aa10.48□□□□□ -0.73
NEDD4-210ENST00000513957 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
NEDD4-210ENST00000513957 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 UTP14AQ9BVJ6 771 aaKnown RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 DICER1Q9UPY3 1922 aaKnown RBP10.48□□□□□ -0.73
NEDD4-210ENST00000513957 A0A0G2JLW4 131 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 SRGNP10124 158 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 YBX3P16989 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
NEDD4-210ENST00000513957 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 KSR2Q6VAB6 950 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 C2CD5Q86YS7 1000 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 TTLL6Q8N841 843 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 CNKSR1Q969H4 720 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 MASTLQ96GX5 879 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 ISCA1Q9BUE6 129 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
NEDD4-210ENST00000513957 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 NPR1P16066 1061 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 GPTP24298 496 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 NEXNQ0ZGT2 675 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 FLIIQ13045 1269 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 SOGA3Q5TF21 947 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 SUSD4Q5VX71 490 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
NEDD4-210ENST00000513957 CCDC191Q8NCU4 936 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.73
NEDD4-210ENST00000513957 PHAXQ9H814 394 aaKnown RBP10.46□□□□□ -0.73
NEDD4-210ENST00000513957 BCS1LQ9Y276 419 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 SH3TC1Q8TE82 1336 aa10.46□□□□□ -0.73
NEDD4-210ENST00000513957 ABCC12Q96J65 1359 aa10.46□□□□□ -0.74
NEDD4-210ENST00000513957 ADCY9O60503 1353 aa10.45□□□□□ -0.74
NEDD4-210ENST00000513957 CHRNA5P30532 468 aa10.45□□□□□ -0.74
NEDD4-210ENST00000513957 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
NEDD4-210ENST00000513957 ALDH1L2Q3SY69 923 aa10.45□□□□□ -0.74
NEDD4-210ENST00000513957 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
NEDD4-210ENST00000513957 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 PTPRCP08575 1304 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 HOXA10P31260 410 aaPredicted RBP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 ERFEQ4G0M1 354 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 ZBTB38Q8NAP3 1195 aaPredicted RBP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 NLRP3Q96P20 1036 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms