RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 SSFA2P28290 1259 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 IDH3AP50213 366 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 SPEM2Q0P670 501 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 NEUROD1Q13562 356 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 NAA30Q147X3 362 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 CAPN12Q6ZSI9 719 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 EDARADDQ8WWZ3 215 aa11.56□□□□□ -0.56
TRAPPC11-210ENST00000513600 BRD2P25440 801 aaKnown RBP11.55□□□□□ -0.56
TRAPPC11-210ENST00000513600 INPP5BP32019 993 aa11.55□□□□□ -0.56
TRAPPC11-210ENST00000513600 ARSDP51689 593 aa11.55□□□□□ -0.56
TRAPPC11-210ENST00000513600 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
TRAPPC11-210ENST00000513600 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
TRAPPC11-210ENST00000513600 MARSP56192 900 aaKnown RBP11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 PCBP4P57723 403 aaKnown RBP11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 GRIN2CQ14957 1233 aa11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 SYT9Q86SS6 491 aa11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 EFCC1Q9HA90 598 aa11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 KLF15Q9UIH9 416 aa11.54□□□□□ -0.56
TRAPPC11-210ENST00000513600 EPXP11678 715 aa11.53□□□□□ -0.56
TRAPPC11-210ENST00000513600 PDE4CQ08493 712 aa11.53□□□□□ -0.56
TRAPPC11-210ENST00000513600 SIN3BO75182 1162 aa11.52□□□□□ -0.57
TRAPPC11-210ENST00000513600 TREML1Q86YW5 311 aa11.52□□□□□ -0.57
TRAPPC11-210ENST00000513600 C11orf16Q9NQ32 467 aa11.52□□□□□ -0.57
TRAPPC11-210ENST00000513600 CARNS1A5YM72 827 aa11.51□□□□□ -0.57
TRAPPC11-210ENST00000513600 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
TRAPPC11-210ENST00000513600 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
TRAPPC11-210ENST00000513600 TNFRSF10BO14763 440 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 CCINQ13939 588 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 GSX2Q9BZM3 304 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 STIM2Q9P246 746 aa11.5□□□□□ -0.57
TRAPPC11-210ENST00000513600 OPLAHO14841 1288 aa11.49□□□□□ -0.57
TRAPPC11-210ENST00000513600 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
TRAPPC11-210ENST00000513600 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC11-210ENST00000513600 MTMR7Q9Y216 660 aa11.49□□□□□ -0.57
TRAPPC11-210ENST00000513600 AMPD1P23109 780 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 RAB44Q7Z6P3 723 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 BHMTQ93088 406 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 BTBD6Q96KE9 485 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 PNMA5Q96PV4 448 aa11.48□□□□□ -0.57
TRAPPC11-210ENST00000513600 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 ELOA3DA6NLF2 546 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 ADARB2-AS1A8MUL3 147 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 RNF225M0QZC1 329 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 ALAS2P22557 587 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 ELOA3BQ3SY89 546 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 ELOA3Q8NG57 546 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
TRAPPC11-210ENST00000513600 SCNN1AP37088 669 aa11.46□□□□□ -0.57
TRAPPC11-210ENST00000513600 PODNQ7Z5L7 613 aa11.46□□□□□ -0.57
TRAPPC11-210ENST00000513600 BEND7Q8N7W2 519 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC11-210ENST00000513600 HELQQ8TDG4 1101 aa11.46□□□□□ -0.57
TRAPPC11-210ENST00000513600 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC11-210ENST00000513600 RGL4Q8IZJ4 473 aa11.45□□□□□ -0.58
TRAPPC11-210ENST00000513600 MDFIQ99750 246 aa11.45□□□□□ -0.58
TRAPPC11-210ENST00000513600 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
TRAPPC11-210ENST00000513600 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
TRAPPC11-210ENST00000513600 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC11-210ENST00000513600 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
TRAPPC11-210ENST00000513600 ZAP70P43403 619 aa11.43□□□□□ -0.58
TRAPPC11-210ENST00000513600 CHSY3Q70JA7 882 aa11.43□□□□□ -0.58
TRAPPC11-210ENST00000513600 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
TRAPPC11-210ENST00000513600 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
TRAPPC11-210ENST00000513600 EGFRP00533 1210 aa11.42□□□□□ -0.58
TRAPPC11-210ENST00000513600 NFKB1P19838 968 aa11.42□□□□□ -0.58
TRAPPC11-210ENST00000513600 KCNMA1Q12791 1236 aa11.42□□□□□ -0.58
TRAPPC11-210ENST00000513600 USP20Q9Y2K6 914 aa11.42□□□□□ -0.58
TRAPPC11-210ENST00000513600 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 XYLBO75191 536 aa11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 MAP3K6O95382 1288 aa11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 ADH7P40394 386 aa11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 MKL2Q9ULH7 1088 aa11.41□□□□□ -0.58
TRAPPC11-210ENST00000513600 ZBTB39O15060 712 aa11.4□□□□□ -0.58
TRAPPC11-210ENST00000513600 SNRPNP63162 240 aaKnown RBP11.4□□□□□ -0.58
TRAPPC11-210ENST00000513600 KANK3Q6NY19 840 aa11.4□□□□□ -0.58
TRAPPC11-210ENST00000513600 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.58
TRAPPC11-210ENST00000513600 PIK3R2O00459 728 aa11.39□□□□□ -0.59
TRAPPC11-210ENST00000513600 SASH3O75995 380 aa11.39□□□□□ -0.59
TRAPPC11-210ENST00000513600 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC11-210ENST00000513600 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
TRAPPC11-210ENST00000513600 RARAP10276 462 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 HOXB4P17483 251 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 DGKGP49619 791 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 TBC1D8BQ0IIM8 1120 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 PCSK7Q16549 785 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 IGFLR1Q9H665 355 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 ZFATQ9P243 1243 aa11.38□□□□□ -0.59
TRAPPC11-210ENST00000513600 FNDC3AQ9Y2H6 1198 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms