RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
CTNND2-215ENST00000513588 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
CTNND2-215ENST00000513588 ZNF592Q92610 1267 aa13.6□□□□□ -0.23
CTNND2-215ENST00000513588 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
CTNND2-215ENST00000513588 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
CTNND2-215ENST00000513588 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
CTNND2-215ENST00000513588 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
CTNND2-215ENST00000513588 PTH1RQ03431 593 aa13.59□□□□□ -0.23
CTNND2-215ENST00000513588 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
CTNND2-215ENST00000513588 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CTNND2-215ENST00000513588 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
CTNND2-215ENST00000513588 PI4K2BQ8TCG2 481 aa13.58□□□□□ -0.23
CTNND2-215ENST00000513588 ZHX1Q9UKY1 873 aaPredicted RBP13.58□□□□□ -0.23
CTNND2-215ENST00000513588 DYNC1I1O14576 645 aa13.58□□□□□ -0.24
CTNND2-215ENST00000513588 NOLC1Q14978 699 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTNND2-215ENST00000513588 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
CTNND2-215ENST00000513588 PRDM10Q9NQV6 1147 aa13.58□□□□□ -0.24
CTNND2-215ENST00000513588 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
CTNND2-215ENST00000513588 GCP02774 474 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 CPLX1O14810 134 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 POLA2Q14181 598 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 FAM173BQ6P4H8 233 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
CTNND2-215ENST00000513588 KDM4AO75164 1064 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
CTNND2-215ENST00000513588 PDLIM2Q96JY6 352 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
CTNND2-215ENST00000513588 CABP4P57796 275 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 DACT1Q9NYF0 836 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 TECPR2O15040 1411 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 RICTORQ6R327 1708 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 KDRP35968 1356 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 A0A087WZG4 1122 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 TPM4P67936 248 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 SUCLG2Q96I99 432 aa13.56□□□□□ -0.24
CTNND2-215ENST00000513588 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTNND2-215ENST00000513588 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
CTNND2-215ENST00000513588 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 AGLP35573 1532 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 ME1P48163 572 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 TERF1P54274 439 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
CTNND2-215ENST00000513588 ATF3P18847 181 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 ME3Q16798 604 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
CTNND2-215ENST00000513588 SLC27A2O14975 620 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 DDX46Q7L014 1031 aaKnown RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 IL25Q9H293 177 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 TPD52L1Q16890 204 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
CTNND2-215ENST00000513588 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
CTNND2-215ENST00000513588 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
CTNND2-215ENST00000513588 BRF1Q92994 677 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 LARGE1O95461 756 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 ZNF165P49910 485 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
CTNND2-215ENST00000513588 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 TYRO3Q06418 890 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 NFATC2IPQ8NCF5 419 aa13.53□□□□□ -0.24
CTNND2-215ENST00000513588 APPP05067 770 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTNND2-215ENST00000513588 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
CTNND2-215ENST00000513588 GUCY1B3Q02153 619 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.25
CTNND2-215ENST00000513588 GOLIM4O00461 696 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 TRDNQ13061 729 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
CTNND2-215ENST00000513588 ITSN1Q15811 1721 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
CTNND2-215ENST00000513588 Q6ZUG5 572 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms