RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 LRRFIP2Q9Y608 721 aaKnown RBP21.53■■□□□ 1.04
ACTN3-203ENST00000513398 AFF2P51816 1311 aa21.53■■□□□ 1.04
ACTN3-203ENST00000513398 CUL4AQ13619 759 aa21.52■■□□□ 1.04
ACTN3-203ENST00000513398 OSBPL3Q9H4L5 887 aa21.52■■□□□ 1.04
ACTN3-203ENST00000513398 ESYT1Q9BSJ8 1104 aa21.52■■□□□ 1.04
ACTN3-203ENST00000513398 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.52■■□□□ 1.04
ACTN3-203ENST00000513398 NBPF26B4DH59 902 aa21.52■■□□□ 1.03
ACTN3-203ENST00000513398 NBPF14Q5TI25 921 aa21.52■■□□□ 1.03
ACTN3-203ENST00000513398 NBPF10Q6P3W6 841 aaKnown RBP21.52■■□□□ 1.03
ACTN3-203ENST00000513398 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.03
ACTN3-203ENST00000513398 NBPF15Q8N660 670 aa21.52■■□□□ 1.03
ACTN3-203ENST00000513398 PALD1Q9ULE6 856 aa21.52■■□□□ 1.03
ACTN3-203ENST00000513398 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
ACTN3-203ENST00000513398 NKX1-1Q15270 411 aaPredicted RBP21.5■■□□□ 1.03
ACTN3-203ENST00000513398 SLC4A9Q96Q91 983 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 USP44Q9H0E7 712 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 GDPD2Q9HCC8 539 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 ANO2Q9NQ90 1003 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 DDX21Q9NR30 783 aaKnown RBP eCLIP21.5■■□□□ 1.03
ACTN3-203ENST00000513398 BCL9LQ86UU0 1499 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 MYD88Q99836 296 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 EXOC6BQ9Y2D4 811 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 ADCY9O60503 1353 aa21.5■■□□□ 1.03
ACTN3-203ENST00000513398 PHF14O94880 888 aa21.49■■□□□ 1.03
ACTN3-203ENST00000513398 DNTTIP2Q5QJE6 756 aaKnown RBP21.49■■□□□ 1.03
ACTN3-203ENST00000513398 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
ACTN3-203ENST00000513398 INTS4Q96HW7 963 aaKnown RBP21.49■■□□□ 1.03
ACTN3-203ENST00000513398 CCT4P50991 539 aaKnown RBP21.49■■□□□ 1.03
ACTN3-203ENST00000513398 MPNDQ8N594 471 aa21.49■■□□□ 1.03
ACTN3-203ENST00000513398 SRCAPQ6ZRS2 3230 aa21.48■■□□□ 1.03
ACTN3-203ENST00000513398 GADD45BO75293 160 aaPredicted RBP21.48■■□□□ 1.03
ACTN3-203ENST00000513398 SCN11AQ9UI33 1791 aa21.47■■□□□ 1.03
ACTN3-203ENST00000513398 RILPL2Q969X0 211 aa21.47■■□□□ 1.03
ACTN3-203ENST00000513398 C9orf78Q9NZ63 289 aaPredicted RBP21.47■■□□□ 1.03
ACTN3-203ENST00000513398 HEG1Q9ULI3 1381 aa21.47■■□□□ 1.03
ACTN3-203ENST00000513398 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
ACTN3-203ENST00000513398 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
ACTN3-203ENST00000513398 TRIM6-TRIM34B2RNG4 842 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 BEND3Q5T5X7 828 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 HYPKQ9NX55 129 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 PLCH1Q4KWH8 1693 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 HOXB7P09629 217 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 ANAPC15P60006 121 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 DISP2A7MBM2 1401 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 ABCC6O95255 1503 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 KDM3BQ7LBC6 1761 aa21.46■■□□□ 1.03
ACTN3-203ENST00000513398 KSR2Q6VAB6 950 aa21.45■■□□□ 1.03
ACTN3-203ENST00000513398 SLIT2O94813 1529 aa21.45■■□□□ 1.03
ACTN3-203ENST00000513398 COL22A1Q8NFW1 1626 aaPredicted RBP21.45■■□□□ 1.02
ACTN3-203ENST00000513398 ANKRD13DQ6ZTN6 518 aa21.45■■□□□ 1.02
ACTN3-203ENST00000513398 USP48Q86UV5 1035 aa21.45■■□□□ 1.02
ACTN3-203ENST00000513398 MX1P20591 662 aa21.45■■□□□ 1.02
ACTN3-203ENST00000513398 CHMLP26374 656 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 FNBP4Q8N3X1 1017 aaPredicted RBP21.44■■□□□ 1.02
ACTN3-203ENST00000513398 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
ACTN3-203ENST00000513398 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 PARP4Q9UKK3 1724 aaKnown RBP21.44■■□□□ 1.02
ACTN3-203ENST00000513398 GNAI2P04899 355 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 LRRCC1Q9C099 1032 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 USP25Q9UHP3 1055 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 PRDM4Q9UKN5 801 aa21.44■■□□□ 1.02
ACTN3-203ENST00000513398 WDR33Q9C0J8 1336 aaKnown RBP21.43■■□□□ 1.02
ACTN3-203ENST00000513398 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
ACTN3-203ENST00000513398 VPS72Q15906 364 aa21.43■■□□□ 1.02
ACTN3-203ENST00000513398 ZNF830Q96NB3 372 aaPredicted RBP21.43■■□□□ 1.02
ACTN3-203ENST00000513398 FAM184AQ8NB25 1140 aa21.43■■□□□ 1.02
ACTN3-203ENST00000513398 SALL3Q9BXA9 1300 aa21.43■■□□□ 1.02
ACTN3-203ENST00000513398 TPRNQ4KMQ1 711 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 MYRIPQ8NFW9 859 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 TBC1D2BQ9UPU7 963 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 IGKV5-2P06315 115 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 CCDC85AQ96PX6 553 aaPredicted RBP21.42■■□□□ 1.02
ACTN3-203ENST00000513398 ATP6V1AP38606 617 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 GJD4Q96KN9 370 aaPredicted RBP21.42■■□□□ 1.02
ACTN3-203ENST00000513398 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
ACTN3-203ENST00000513398 SPATA31A6Q5VVP1 1343 aa21.41■■□□□ 1.02
ACTN3-203ENST00000513398 UVSSAQ2YD98 709 aa21.41■■□□□ 1.02
ACTN3-203ENST00000513398 KLHDC4Q8TBB5 520 aa21.41■■□□□ 1.02
ACTN3-203ENST00000513398 SMAP1Q8IYB5 467 aaPredicted RBP21.41■■□□□ 1.02
ACTN3-203ENST00000513398 DDX58O95786 925 aaKnown RBP21.4■■□□□ 1.02
ACTN3-203ENST00000513398 GPTP24298 496 aa21.4■■□□□ 1.02
ACTN3-203ENST00000513398 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
ACTN3-203ENST00000513398 PIBF1Q8WXW3 757 aa21.4■■□□□ 1.02
ACTN3-203ENST00000513398 THRAP3Q9Y2W1 955 aaKnown RBP21.4■■□□□ 1.02
ACTN3-203ENST00000513398 C5P01031 1676 aa21.4■■□□□ 1.02
ACTN3-203ENST00000513398 SHANK3Q9BYB0 1731 aa21.4■■□□□ 1.02
ACTN3-203ENST00000513398 CCDC183Q5T5S1 534 aa21.39■■□□□ 1.02
ACTN3-203ENST00000513398 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.02
ACTN3-203ENST00000513398 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
ACTN3-203ENST00000513398 TTC12Q9H892 705 aaPredicted RBP21.39■■□□□ 1.01
ACTN3-203ENST00000513398 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.01
ACTN3-203ENST00000513398 SRGAP3O43295 1099 aa21.39■■□□□ 1.01
ACTN3-203ENST00000513398 ADCY5O95622 1261 aa21.39■■□□□ 1.01
ACTN3-203ENST00000513398 NOLC1Q14978 699 aaKnown RBP eCLIP21.39■■□□□ 1.01
ACTN3-203ENST00000513398 SEPT12Q8IYM1 358 aa21.39■■□□□ 1.01
ACTN3-203ENST00000513398 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
ACTN3-203ENST00000513398 UBE3BQ7Z3V4 1068 aa21.38■■□□□ 1.01
ACTN3-203ENST00000513398 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
ACTN3-203ENST00000513398 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms