RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMN1-208ENST00000513228 MKL2Q9ULH7 1088 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.52□□□□□ -1.69
SMN1-208ENST00000513228 SHISA8B8ZZ34 492 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 PIK3R2O00459 728 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 PRMT3O60678 531 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 SFSWAPQ12872 951 aaKnown RBP4.52□□□□□ -1.69
SMN1-208ENST00000513228 UBAP2LQ14157 1087 aaKnown RBP4.52□□□□□ -1.69
SMN1-208ENST00000513228 CFAP70Q5T0N1 1121 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 SYT9Q86SS6 491 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 ZNF280CQ8ND82 737 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 BHMTQ93088 406 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 SUSD3Q96L08 255 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 STRN4Q9NRL3 753 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 NDFIP2Q9NV92 336 aa4.52□□□□□ -1.69
SMN1-208ENST00000513228 GPC6Q9Y625 555 aaPredicted RBP4.52□□□□□ -1.69
SMN1-208ENST00000513228 EPXP11678 715 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 SAMD5Q5TGI4 173 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 ZNF468Q5VIY5 522 aaPredicted RBP4.51□□□□□ -1.69
SMN1-208ENST00000513228 SLCO4C1Q6ZQN7 724 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 ZNF295-AS1Q8N0V1 137 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 PRIMPOLQ96LW4 560 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 C2orf49Q9BVC5 232 aaPredicted RBP4.51□□□□□ -1.69
SMN1-208ENST00000513228 UBE2OQ9C0C9 1292 aaKnown RBP4.51□□□□□ -1.69
SMN1-208ENST00000513228 KLK14Q9P0G3 267 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 SERPINA10Q9UK55 444 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
SMN1-208ENST00000513228 C21orf2O43822 256 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 EPB42P16452 691 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 IGFBP4P22692 258 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 SNRPNP63162 240 aaKnown RBP4.5□□□□□ -1.69
SMN1-208ENST00000513228 SPEM2Q0P670 501 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 DGKZQ13574 1117 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 RTN1Q16799 776 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 C1orf229Q6ZS94 237 aaPredicted RBP4.5□□□□□ -1.69
SMN1-208ENST00000513228 KRT25Q7Z3Z0 450 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 BTLAQ7Z6A9 289 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 ALYREFQ86V81 257 aaKnown RBP4.5□□□□□ -1.69
SMN1-208ENST00000513228 BTBD6Q96KE9 485 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 MKNK1Q9BUB5 465 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 LRRC4BQ9NT99 713 aa4.5□□□□□ -1.69
SMN1-208ENST00000513228 HIRAP54198 1017 aaPredicted RBP4.49□□□□□ -1.69
SMN1-208ENST00000513228 FAM182BQ5T319 152 aa4.49□□□□□ -1.69
SMN1-208ENST00000513228 CHSY3Q70JA7 882 aa4.49□□□□□ -1.69
SMN1-208ENST00000513228 SLC30A3Q99726 388 aa4.49□□□□□ -1.69
SMN1-208ENST00000513228 ELOA3CA0A087WX78 387 aaPredicted RBP4.48□□□□□ -1.69
SMN1-208ENST00000513228 ELOA3DA6NLF2 546 aaPredicted RBP4.48□□□□□ -1.69
SMN1-208ENST00000513228 GNB5O14775 395 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 EFSO43281 561 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 FOXO3O43524 673 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 DKK1O94907 266 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 TYRO3Q06418 890 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 ELOA3BQ3SY89 546 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 FCHSD1Q86WN1 690 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 STAG2Q8N3U4 1231 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 ELOA3Q8NG57 546 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 STK32AQ8WU08 396 aa4.48□□□□□ -1.69
SMN1-208ENST00000513228 ACIN1Q9UKV3 1341 aaKnown RBP4.47□□□□□ -1.69
SMN1-208ENST00000513228 SPDYE3A6NKU9 549 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 PAX4O43316 350 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 ADH7P40394 386 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 IDH3AP50213 366 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 NAA30Q147X3 362 aaPredicted RBP4.47□□□□□ -1.69
SMN1-208ENST00000513228 MCTP1Q6DN14 999 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 CMTR1Q8N1G2 835 aaKnown RBP4.47□□□□□ -1.69
SMN1-208ENST00000513228 PBXIP1Q96AQ6 731 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 IFT43Q96FT9 208 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 ARXQ96QS3 562 aa4.47□□□□□ -1.69
SMN1-208ENST00000513228 AVENQ9NQS1 362 aaPredicted RBP4.47□□□□□ -1.69
SMN1-208ENST00000513228 NOP53Q9NZM5 478 aaKnown RBP4.47□□□□□ -1.69
SMN1-208ENST00000513228 TGFBR3LH3BV60 316 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 M0R082 166 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 MICAL2O94851 1124 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 NFKB1P19838 968 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 WEE1P30291 646 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 ARSDP51689 593 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 CCINQ13939 588 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 DOC2BQ14184 412 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 SWI5Q1ZZU3 235 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 C11orf91Q3C1V1 193 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 RGL4Q8IZJ4 473 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 CCDC82Q8N4S0 544 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 ZNF417Q8TAU3 575 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 NUDT8Q8WV74 236 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 ZNF587Q96SQ5 575 aaPredicted RBP4.46□□□□□ -1.7
SMN1-208ENST00000513228 ARID3AQ99856 593 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 KLF15Q9UIH9 416 aa4.46□□□□□ -1.7
SMN1-208ENST00000513228 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.46□□□□□ -1.7
SMN1-208ENST00000513228 C1QTNF9BB2RNN3 333 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 SIN3BO75182 1162 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 RARAP10276 462 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 COL8A1P27658 744 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 ARID4AP29374 1257 aaPredicted RBP4.45□□□□□ -1.7
SMN1-208ENST00000513228 FKBP5Q13451 457 aaPredicted RBP4.45□□□□□ -1.7
SMN1-208ENST00000513228 PRRT3Q5FWE3 981 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 TRAPPC3LQ5T215 181 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 TMEM164Q5U3C3 297 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 TTC16Q8NEE8 873 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 FMNL2Q96PY5 1086 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms