RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 C10orf62Q5T681 223 aaPredicted RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 ICE2Q659A1 982 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 KRT26Q7Z3Y9 468 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 JAMLQ86YT9 394 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 HNRNPLLQ8WVV9 542 aaKnown RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 ZDHHC16Q969W1 377 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 MS4A3Q96HJ5 214 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 ZNF700Q9H0M5 742 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 CHST12Q9NRB3 414 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 TMEM260Q9NX78 707 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 INTUQ9ULD6 942 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 TRIM35Q9UPQ4 493 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 LZTS1Q9Y250 596 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 MRVI1Q9Y6F6 885 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 V9GY48 417 aaPredicted RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 ERBB3P21860 1342 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 ALG1L2C9J202 215 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 KLF4O43474 513 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 FOXO3O43524 673 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 SLC34A2O95436 690 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 TRAPPC10P48553 1259 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 PTK2Q05397 1052 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 TTF1Q15361 905 aaPredicted RBP4.19□□□□□ -1.74
PVT1-202ENST00000512617 GRAMD1BQ3KR37 738 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 TSGA10IPQ3SY00 556 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 RNF20Q5VTR2 975 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 DESI1Q6ICB0 168 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 KSR2Q6VAB6 950 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 DRC7Q8IY82 874 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 LILRB2Q8N423 598 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 TSEN2Q8NCE0 465 aaKnown RBP4.19□□□□□ -1.74
PVT1-202ENST00000512617 DNAJC7Q99615 494 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.19□□□□□ -1.74
PVT1-202ENST00000512617 PNMA3Q9UL41 463 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
PVT1-202ENST00000512617 BAZ1BQ9UIG0 1483 aaKnown RBP4.18□□□□□ -1.74
PVT1-202ENST00000512617 CCDC163A0A0D9SF12 145 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 SCGB1D2O95969 90 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 LDHCP07864 332 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 KCTD2Q14681 263 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 LRRC41Q15345 812 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 INO80DQ53TQ3 878 aaPredicted RBP4.18□□□□□ -1.74
PVT1-202ENST00000512617 AXDND1Q5T1B0 1012 aaPredicted RBP4.18□□□□□ -1.74
PVT1-202ENST00000512617 SLC4A10Q6U841 1118 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 LYPD8Q6UX82 237 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 C14orf80Q86SX3 495 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 RETREG3Q86VR2 466 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 MYO1HQ8N1T3 1032 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 ZNF454Q8N9F8 522 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 TEX19Q8NA77 164 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 GAS2L2Q8NHY3 880 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 NEUROD6Q96NK8 337 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 CFHR5Q9BXR6 569 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 PPCSQ9HAB8 311 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 KLF15Q9UIH9 416 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 MCM8Q9UJA3 840 aa4.18□□□□□ -1.74
PVT1-202ENST00000512617 NESP48681 1621 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 USP31Q70CQ4 1352 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 SHTN1A0MZ66 631 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 M0R2N6 131 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 RASGRP1O95267 797 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 IGFBP4P22692 258 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 PMLP29590 882 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CTHP32929 405 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 SLC4A3P48751 1232 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CLCN6P51797 869 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 RASSF7Q02833 373 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 TCEA2Q15560 299 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 TAF1CQ15572 869 aaPredicted RBP4.17□□□□□ -1.74
PVT1-202ENST00000512617 TMEM95Q3KNT9 176 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 TKFCQ3LXA3 575 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CT47A1Q5JQC4 288 aaPredicted RBP4.17□□□□□ -1.74
PVT1-202ENST00000512617 ZKSCAN2Q63HK3 967 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 C16orf46Q6P387 395 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 HDGFL2Q7Z4V5 671 aaPredicted RBP4.17□□□□□ -1.74
PVT1-202ENST00000512617 CHPFQ8IZ52 775 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 IFNL3Q8IZI9 196 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 MYRIPQ8NFW9 859 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 NKX2-3Q8TAU0 364 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CHAC2Q8WUX2 184 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CPLX3Q8WVH0 158 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 TATDN2Q93075 761 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CSRNP1Q96S65 589 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CDC5LQ99459 802 aaKnown RBP4.17□□□□□ -1.74
PVT1-202ENST00000512617 SPON2Q9BUD6 331 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CCDC113Q9H0I3 377 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 AS3MTQ9HBK9 375 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 ENAMQ9NRM1 1142 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 FRMD4BQ9Y2L6 1034 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 MRPS23Q9Y3D9 190 aaKnown RBP4.17□□□□□ -1.74
PVT1-202ENST00000512617 GPSM3Q9Y4H4 160 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 CUX2O14529 1486 aa4.17□□□□□ -1.74
PVT1-202ENST00000512617 MYL3P08590 195 aa4.16□□□□□ -1.74
PVT1-202ENST00000512617 VDRP11473 427 aa4.16□□□□□ -1.74
PVT1-202ENST00000512617 FUT2Q10981 343 aa4.16□□□□□ -1.74
PVT1-202ENST00000512617 SQSTM1Q13501 440 aa4.16□□□□□ -1.74
PVT1-202ENST00000512617 ACBD5Q5T8D3 534 aaPredicted RBP4.16□□□□□ -1.74
PVT1-202ENST00000512617 CCDC70Q6NSX1 233 aa4.16□□□□□ -1.74
PVT1-202ENST00000512617 ERMP1Q7Z2K6 904 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms