RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 DDX21Q9NR30 783 aaKnown RBP eCLIP22.15■■□□□ 1.14
SNX2-211ENST00000512394 APAF1O14727 1248 aa22.14■■□□□ 1.13
SNX2-211ENST00000512394 RTKN2Q8IZC4 609 aa22.14■■□□□ 1.13
SNX2-211ENST00000512394 RPGRQ92834 1020 aaKnown RBP22.14■■□□□ 1.13
SNX2-211ENST00000512394 FKBP4Q02790 459 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNX2-211ENST00000512394 HSP90AB3PQ58FF7 597 aa22.13■■□□□ 1.13
SNX2-211ENST00000512394 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
SNX2-211ENST00000512394 COPS6Q7L5N1 327 aa22.13■■□□□ 1.13
SNX2-211ENST00000512394 XAGE3Q8WTP9 111 aa22.13■■□□□ 1.13
SNX2-211ENST00000512394 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
SNX2-211ENST00000512394 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
SNX2-211ENST00000512394 AIMP1Q12904 312 aaKnown RBP22.12■■□□□ 1.13
SNX2-211ENST00000512394 SMC1BQ8NDV3 1235 aa22.12■■□□□ 1.13
SNX2-211ENST00000512394 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
SNX2-211ENST00000512394 UTP14AQ9BVJ6 771 aaKnown RBP22.11■■□□□ 1.13
SNX2-211ENST00000512394 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
SNX2-211ENST00000512394 OLFM4Q6UX06 510 aa22.1■■□□□ 1.13
SNX2-211ENST00000512394 RBM17Q96I25 401 aaKnown RBP22.1■■□□□ 1.13
SNX2-211ENST00000512394 MBIPQ9NS73 344 aa22.1■■□□□ 1.13
SNX2-211ENST00000512394 DBF4Q9UBU7 674 aaPredicted RBP22.1■■□□□ 1.13
SNX2-211ENST00000512394 LAMB2P55268 1798 aa22.1■■□□□ 1.13
SNX2-211ENST00000512394 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
SNX2-211ENST00000512394 CC2D2BQ6DHV5 1058 aa22.09■■□□□ 1.13
SNX2-211ENST00000512394 IFT57Q9NWB7 429 aa22.09■■□□□ 1.13
SNX2-211ENST00000512394 SNED1Q8TER0 1413 aa22.08■■□□□ 1.13
SNX2-211ENST00000512394 GNAI1P63096 354 aa22.08■■□□□ 1.13
SNX2-211ENST00000512394 DUSP27Q5VZP5 1158 aa22.08■■□□□ 1.13
SNX2-211ENST00000512394 NLRP3Q96P20 1036 aa22.08■■□□□ 1.13
SNX2-211ENST00000512394 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
SNX2-211ENST00000512394 ZNF277Q9NRM2 450 aaPredicted RBP22.08■■□□□ 1.13
SNX2-211ENST00000512394 ZNF853P0CG23 659 aa22.07■■□□□ 1.12
SNX2-211ENST00000512394 TCIRG1Q13488 830 aa22.07■■□□□ 1.12
SNX2-211ENST00000512394 NLRP10Q86W26 655 aa22.07■■□□□ 1.12
SNX2-211ENST00000512394 PSMD1Q99460 953 aa22.07■■□□□ 1.12
SNX2-211ENST00000512394 SCN4AP35499 1836 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 POTECB2RU33 542 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 PPEF1O14829 653 aaPredicted RBP22.06■■□□□ 1.12
SNX2-211ENST00000512394 IARSP41252 1262 aaKnown RBP22.06■■□□□ 1.12
SNX2-211ENST00000512394 GRIPAP1Q4V328 841 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 HYPKQ9NX55 129 aa22.06■■□□□ 1.12
SNX2-211ENST00000512394 DDNO94850 711 aaPredicted RBP22.05■■□□□ 1.12
SNX2-211ENST00000512394 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
SNX2-211ENST00000512394 PLBD2Q8NHP8 589 aa22.05■■□□□ 1.12
SNX2-211ENST00000512394 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
SNX2-211ENST00000512394 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
SNX2-211ENST00000512394 IQCA1LA6NCM1 817 aa22.03■■□□□ 1.12
SNX2-211ENST00000512394 ANKRD13DQ6ZTN6 518 aa22.03■■□□□ 1.12
SNX2-211ENST00000512394 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
SNX2-211ENST00000512394 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
SNX2-211ENST00000512394 L3MBTL3Q96JM7 780 aaPredicted RBP22.02■■□□□ 1.12
SNX2-211ENST00000512394 ZNF541Q9H0D2 1346 aa22.02■■□□□ 1.12
SNX2-211ENST00000512394 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
SNX2-211ENST00000512394 ABCC4O15439 1325 aa22.01■■□□□ 1.11
SNX2-211ENST00000512394 FZD9O00144 591 aa22■■□□□ 1.11
SNX2-211ENST00000512394 TCERG1O14776 1098 aaKnown RBP22■■□□□ 1.11
SNX2-211ENST00000512394 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
SNX2-211ENST00000512394 WWC1Q8IX03 1113 aa22■■□□□ 1.11
SNX2-211ENST00000512394 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
SNX2-211ENST00000512394 JDP2Q8WYK2 163 aa22■■□□□ 1.11
SNX2-211ENST00000512394 ISCA1Q9BUE6 129 aa21.99■■□□□ 1.11
SNX2-211ENST00000512394 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
SNX2-211ENST00000512394 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
SNX2-211ENST00000512394 IL16Q14005 1332 aa21.99■■□□□ 1.11
SNX2-211ENST00000512394 ELL2O00472 640 aaPredicted RBP21.98■■□□□ 1.11
SNX2-211ENST00000512394 HTRA3P83110 453 aa21.98■■□□□ 1.11
SNX2-211ENST00000512394 GOLGA2Q08379 1002 aa21.98■■□□□ 1.11
SNX2-211ENST00000512394 COL4A5P29400 1685 aa21.98■■□□□ 1.11
SNX2-211ENST00000512394 CHADLQ6NUI6 762 aa21.97■■□□□ 1.11
SNX2-211ENST00000512394 DDX46Q7L014 1031 aaKnown RBP21.97■■□□□ 1.11
SNX2-211ENST00000512394 FAM9BQ8IZU0 186 aa21.97■■□□□ 1.11
SNX2-211ENST00000512394 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 BBOX1O75936 387 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 SLC51AQ86UW1 340 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 GPC2Q8N158 579 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 LARGE2Q8N3Y3 721 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 C8orf58Q8NAV2 365 aa21.96■■□□□ 1.11
SNX2-211ENST00000512394 TAF1DQ9H5J8 278 aaPredicted RBP21.96■■□□□ 1.11
SNX2-211ENST00000512394 LRRC37AA6NMS7 1700 aa21.95■■□□□ 1.1
SNX2-211ENST00000512394 TAF1P21675 1872 aa21.95■■□□□ 1.1
SNX2-211ENST00000512394 EIF6P56537 245 aaKnown RBP21.95■■□□□ 1.1
SNX2-211ENST00000512394 ZNF428Q96B54 188 aa21.95■■□□□ 1.1
SNX2-211ENST00000512394 KLRG1Q96E93 195 aa21.95■■□□□ 1.1
SNX2-211ENST00000512394 HACL1Q9UJ83 578 aa21.95■■□□□ 1.1
SNX2-211ENST00000512394 POTEIP0CG38 1075 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 POTEJP0CG39 1038 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 TRIM28Q13263 835 aaKnown RBP21.94■■□□□ 1.1
SNX2-211ENST00000512394 GRAPQ13588 217 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 LDHDQ86WU2 507 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 SUPT20HQ8NEM7 779 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 GRAPLQ8TC17 118 aaPredicted RBP21.94■■□□□ 1.1
SNX2-211ENST00000512394 FAM89AQ96GI7 184 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 VPS33BQ9H267 617 aa21.94■■□□□ 1.1
SNX2-211ENST00000512394 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
SNX2-211ENST00000512394 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
SNX2-211ENST00000512394 SP8Q8IXZ3 490 aa21.93■■□□□ 1.1
SNX2-211ENST00000512394 NIM1KQ8IY84 436 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms