RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SYCP2LQ5T4T6 812 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 ZNF280DQ6N043 979 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
CHD1-208ENST00000512392 TMC4Q7Z404 712 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 ALDH1A1P00352 501 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 SERINC3Q13530 473 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 WDR75Q8IWA0 830 aaKnown RBP8.06□□□□□ -1.12
CHD1-208ENST00000512392 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 VTI1BQ9UEU0 232 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
CHD1-208ENST00000512392 GRM5P41594 1212 aa8.05□□□□□ -1.12
CHD1-208ENST00000512392 NCOA4Q13772 614 aa8.05□□□□□ -1.12
CHD1-208ENST00000512392 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
CHD1-208ENST00000512392 KCTD15Q96SI1 283 aaPredicted RBP8.05□□□□□ -1.12
CHD1-208ENST00000512392 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
CHD1-208ENST00000512392 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
CHD1-208ENST00000512392 ADH1CP00326 375 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
CHD1-208ENST00000512392 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHD1-208ENST00000512392 FRMD6Q96NE9 622 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 ARPC5LQ9BPX5 153 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 ESPNB1AK53 854 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 PPP1R12AO14974 1030 aaPredicted RBP8.04□□□□□ -1.12
CHD1-208ENST00000512392 LGR5O75473 907 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 FGAP02671 866 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 DAB2P98082 770 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 NR5A1Q13285 461 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 SDR16C5Q8N3Y7 309 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
CHD1-208ENST00000512392 APBA2Q99767 749 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 JADE2Q9NQC1 790 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 TYW1Q9NV66 732 aaKnown RBP8.04□□□□□ -1.12
CHD1-208ENST00000512392 CXXC1Q9P0U4 656 aaPredicted RBP8.04□□□□□ -1.12
CHD1-208ENST00000512392 KLF15Q9UIH9 416 aa8.04□□□□□ -1.12
CHD1-208ENST00000512392 GFRA3O60609 400 aa8.03□□□□□ -1.12
CHD1-208ENST00000512392 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
CHD1-208ENST00000512392 SAFB2Q14151 953 aaKnown RBP eCLIP8.03□□□□□ -1.12
CHD1-208ENST00000512392 LAPTM4AQ15012 233 aa8.03□□□□□ -1.12
CHD1-208ENST00000512392 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
CHD1-208ENST00000512392 PRPF38AQ8NAV1 312 aaKnown RBP8.03□□□□□ -1.12
CHD1-208ENST00000512392 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■■■□ 23
CHD1-208ENST00000512392 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
CHD1-208ENST00000512392 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
CHD1-208ENST00000512392 J3QL48 77 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 TREHO43280 583 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 SMPD1P17405 629 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 CD53P19397 219 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 RNF20Q5VTR2 975 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 USP48Q86UV5 1035 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 PAGR1Q9BTK6 254 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 PRKAB1Q9Y478 270 aa8.02□□□□□ -1.12
CHD1-208ENST00000512392 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
CHD1-208ENST00000512392 CLDN10P78369 228 aa8.02□□□□□ -1.13
CHD1-208ENST00000512392 AVENQ9NQS1 362 aaPredicted RBP8.02□□□□□ -1.13
CHD1-208ENST00000512392 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 NEUROD6Q96NK8 337 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 INO80BQ9C086 356 aaPredicted RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 IFRD1O00458 451 aaPredicted RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 FSHRP23945 695 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 MAPK8P45983 427 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 PSMD2Q13200 908 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 CCSAPQ6IQ19 270 aaPredicted RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 PCGF5Q86SE9 256 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 PHTF2Q8N3S3 785 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 OGFOD1Q8N543 542 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 SRA1Q9HD15 236 aaKnown RBP8.01□□□□□ -1.13
CHD1-208ENST00000512392 FANCLQ9NW38 375 aa8.01□□□□□ -1.13
CHD1-208ENST00000512392 ATF4P18848 351 aaPredicted RBP8□□□□□ -1.13
CHD1-208ENST00000512392 DHX9Q08211 1270 aaKnown RBP8□□□□□ -1.13
CHD1-208ENST00000512392 C1orf131Q8NDD1 294 aaKnown RBP8□□□□□ -1.13
CHD1-208ENST00000512392 SRPK1Q96SB4 655 aaKnown RBP8□□□□□ -1.13
CHD1-208ENST00000512392 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
CHD1-208ENST00000512392 IRX2Q9BZI1 471 aaPredicted RBP8□□□□□ -1.13
CHD1-208ENST00000512392 NAP1L2Q9ULW6 460 aaPredicted RBP8□□□□□ -1.13
CHD1-208ENST00000512392 DKK1O94907 266 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 NNTQ13423 1086 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 CXorf38Q8TB03 319 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 RBCK1Q9BYM8 510 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 DGAT1O75907 488 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 DSC3Q14574 896 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 LRRC41Q15345 812 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 CCDC116Q8IYX3 515 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 ZNF654Q8IZM8 581 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 TRIM52Q96A61 297 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 NAP1L4Q99733 375 aaKnown RBP7.99□□□□□ -1.13
CHD1-208ENST00000512392 CASS4Q9NQ75 786 aa7.99□□□□□ -1.13
CHD1-208ENST00000512392 RPGRIP1LQ68CZ1 1315 aa7.98□□□□□ -1.13
CHD1-208ENST00000512392 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
CHD1-208ENST00000512392 NR3C2P08235 984 aa7.98□□□□□ -1.13
CHD1-208ENST00000512392 C10orf62Q5T681 223 aaPredicted RBP7.98□□□□□ -1.13
CHD1-208ENST00000512392 GET4Q7L5D6 327 aaPredicted RBP7.98□□□□□ -1.13
CHD1-208ENST00000512392 JAMLQ86YT9 394 aa7.98□□□□□ -1.13
CHD1-208ENST00000512392 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
CHD1-208ENST00000512392 FAM126AQ9BYI3 521 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms