RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 SLC30A3Q99726 388 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 CEP162Q5TB80 1403 aa8.2□□□□□ -1.1
MSH3-202ENST00000512258 TXLNAP40222 546 aa8.19□□□□□ -1.1
MSH3-202ENST00000512258 TRIM28Q13263 835 aaKnown RBP8.19□□□□□ -1.1
MSH3-202ENST00000512258 MBTPS1Q14703 1052 aa8.19□□□□□ -1.1
MSH3-202ENST00000512258 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
MSH3-202ENST00000512258 SERTAD1Q9UHV2 236 aa8.19□□□□□ -1.1
MSH3-202ENST00000512258 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
MSH3-202ENST00000512258 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
MSH3-202ENST00000512258 SAMD9Q5K651 1589 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 A6NJY4 79 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 CLIP1P30622 1438 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 KIAA0556O60303 1618 aa8.18□□□□□ -1.1
MSH3-202ENST00000512258 SLFNL1Q499Z3 407 aa8.17□□□□□ -1.1
MSH3-202ENST00000512258 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
MSH3-202ENST00000512258 ARHGEF11O15085 1522 aa8.17□□□□□ -1.1
MSH3-202ENST00000512258 RIMBP3CA6NJZ7 1639 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 RIMBP3BA6NNM3 1639 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
MSH3-202ENST00000512258 IRF5Q13568 498 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 ARAP1Q96P48 1450 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
MSH3-202ENST00000512258 CABP1Q9NZU7 370 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 RIMBP3Q9UFD9 1639 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 GJA3Q9Y6H8 435 aa8.16□□□□□ -1.1
MSH3-202ENST00000512258 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
MSH3-202ENST00000512258 C9orf172C9J069 976 aa8.15□□□□□ -1.1
MSH3-202ENST00000512258 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
MSH3-202ENST00000512258 EFCAB5A4FU69 1503 aa8.14□□□□□ -1.11
MSH3-202ENST00000512258 EML1O00423 815 aa8.14□□□□□ -1.11
MSH3-202ENST00000512258 ADH7P40394 386 aa8.14□□□□□ -1.11
MSH3-202ENST00000512258 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
MSH3-202ENST00000512258 LRRC69Q6ZNQ3 347 aa8.13□□□□□ -1.11
MSH3-202ENST00000512258 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
MSH3-202ENST00000512258 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
MSH3-202ENST00000512258 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
MSH3-202ENST00000512258 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
MSH3-202ENST00000512258 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.11
MSH3-202ENST00000512258 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
MSH3-202ENST00000512258 PTPRGP23470 1445 aa8.12□□□□□ -1.11
MSH3-202ENST00000512258 ELNP15502 786 aa8.11□□□□□ -1.11
MSH3-202ENST00000512258 MCTP1Q6DN14 999 aa8.11□□□□□ -1.11
MSH3-202ENST00000512258 PLPP7Q8NBV4 271 aa8.11□□□□□ -1.11
MSH3-202ENST00000512258 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
MSH3-202ENST00000512258 PLB1Q6P1J6 1458 aa8.11□□□□□ -1.11
MSH3-202ENST00000512258 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 MAP7D1Q3KQU3 841 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 CYB5RLQ6IPT4 315 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
MSH3-202ENST00000512258 IL27Q8NEV9 243 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 TP53INP1Q96A56 240 aa8.1□□□□□ -1.11
MSH3-202ENST00000512258 SCHIP1Q9P0W5 487 aaPredicted RBP8.1□□□□□ -1.11
MSH3-202ENST00000512258 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
MSH3-202ENST00000512258 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
MSH3-202ENST00000512258 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
MSH3-202ENST00000512258 EPHA4P54764 986 aa8.08□□□□□ -1.12
MSH3-202ENST00000512258 NRG1Q02297 640 aaPredicted RBP8.08□□□□□ -1.12
MSH3-202ENST00000512258 TEAD4Q15561 434 aa8.08□□□□□ -1.12
MSH3-202ENST00000512258 ABCA8O94911 1581 aa8.08□□□□□ -1.12
MSH3-202ENST00000512258 FMN1Q68DA7 1419 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 APBB1O00213 710 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 NOS2P35228 1153 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 RNF112Q9ULX5 631 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
MSH3-202ENST00000512258 LILRB5O75023 590 aa8.06□□□□□ -1.12
MSH3-202ENST00000512258 KCNQ4P56696 695 aa8.06□□□□□ -1.12
MSH3-202ENST00000512258 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
MSH3-202ENST00000512258 GPC6Q9Y625 555 aaPredicted RBP8.06□□□□□ -1.12
MSH3-202ENST00000512258 LRRIQ1Q96JM4 1722 aa8.06□□□□□ -1.12
MSH3-202ENST00000512258 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
MSH3-202ENST00000512258 CASKIN1Q8WXD9 1431 aa8.05□□□□□ -1.12
MSH3-202ENST00000512258 ABCC2Q92887 1545 aa8.05□□□□□ -1.12
MSH3-202ENST00000512258 KRTAP4-7Q9BYR0 210 aa8.05□□□□□ -1.12
MSH3-202ENST00000512258 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
MSH3-202ENST00000512258 ZNF358Q9NW07 568 aa8.04□□□□□ -1.12
MSH3-202ENST00000512258 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
MSH3-202ENST00000512258 CDK13Q14004 1512 aaKnown RBP8.03□□□□□ -1.12
MSH3-202ENST00000512258 UHRF1BP1LA0JNW5 1464 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 ATP10BO94823 1461 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 FYCO1Q9BQS8 1478 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 SLC9A9Q8IVB4 645 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
MSH3-202ENST00000512258 BRD7Q9NPI1 651 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
MSH3-202ENST00000512258 PIK3CDO00329 1044 aa8.02□□□□□ -1.13
MSH3-202ENST00000512258 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
MSH3-202ENST00000512258 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
MSH3-202ENST00000512258 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
MSH3-202ENST00000512258 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
MSH3-202ENST00000512258 SLC6A14Q9UN76 642 aa8.02□□□□□ -1.13
MSH3-202ENST00000512258 EPRSP07814 1512 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms