RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.51	■□□□□ 0.55
MATR3-238	ENST00000512107	DDX60	Q8IY21	1712 aa	Known RBP	18.51	■□□□□ 0.55
MATR3-238	ENST00000512107	KIAA1551	Q9HCM1	1747 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	CASP7	P55210	303 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	RRP1	P56182	461 aa	Known RBP	18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	ERFE	Q4G0M1	354 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	PRR5L	Q6MZQ0	368 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	C3orf67	Q6ZVT6	689 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	API5	Q9BZZ5	524 aa	Known RBP	18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	PXDNL	A1KZ92	1463 aa		18.5	■□□□□ 0.55
MATR3-238	ENST00000512107	RTL5	Q5HYW3	569 aa	Predicted RBP	18.49	■□□□□ 0.55
MATR3-238	ENST00000512107	LINS1	Q8NG48	757 aa		18.49	■□□□□ 0.55
MATR3-238	ENST00000512107	LAMB2	P55268	1798 aa		18.48	■□□□□ 0.55
MATR3-238	ENST00000512107	COL4A1	P02462	1669 aa		18.48	■□□□□ 0.55
MATR3-238	ENST00000512107	GCKR	Q14397	625 aa		18.48	■□□□□ 0.55
MATR3-238	ENST00000512107	HSP90AB3P	Q58FF7	597 aa		18.48	■□□□□ 0.55
MATR3-238	ENST00000512107	FAM89A	Q96GI7	184 aa		18.48	■□□□□ 0.55
MATR3-238	ENST00000512107	KIF13B	Q9NQT8	1826 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107		H7C1W4	665 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	INTS3	Q68E01	1043 aa	Known RBP	18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	DZIP1L	Q8IYY4	767 aa	Known RBP	18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	CCDC191	Q8NCU4	936 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	SRCIN1	Q9C0H9	1055 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	SPON1	Q9HCB6	807 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	CWC25	Q9NXE8	425 aa	Predicted RBP	18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	PARP3	Q9Y6F1	533 aa		18.47	■□□□□ 0.55
MATR3-238	ENST00000512107	COL11A2	P13942	1736 aa	Predicted RBP	18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	IPO8	O15397	1037 aa	Known RBP	18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	KAZALD1	Q96I82	304 aa		18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	UTP14A	Q9BVJ6	771 aa	Known RBP	18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	USP44	Q9H0E7	712 aa		18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	C10orf71	Q711Q0	1435 aa		18.46	■□□□□ 0.55
MATR3-238	ENST00000512107	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	HCLS1	P14317	486 aa	Predicted RBP	18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	YY1	P25490	414 aa		18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	PARP10	Q53GL7	1025 aa		18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	EPHA10	Q5JZY3	1008 aa		18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	TRMT112	Q9UI30	125 aa	Known RBP	18.45	■□□□□ 0.54
MATR3-238	ENST00000512107	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.44	■□□□□ 0.54
MATR3-238	ENST00000512107	ALDH1L1	O75891	902 aa		18.44	■□□□□ 0.54
MATR3-238	ENST00000512107	NEXN	Q0ZGT2	675 aa		18.44	■□□□□ 0.54
MATR3-238	ENST00000512107	MEIS3	Q99687	375 aa		18.44	■□□□□ 0.54
MATR3-238	ENST00000512107	COG6	Q9Y2V7	657 aa		18.44	■□□□□ 0.54
MATR3-238	ENST00000512107	PCCA	P05165	728 aa	Predicted RBP	18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	UBE3B	Q7Z3V4	1068 aa		18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	PPP1R42	Q7Z4L9	355 aa		18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	SLC51A	Q86UW1	340 aa		18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	CNBD1	Q8NA66	436 aa		18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	TAF1	P21675	1872 aa		18.43	■□□□□ 0.54
MATR3-238	ENST00000512107	POLD1	P28340	1107 aa		18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	CCT4	P50991	539 aa	Known RBP	18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	IRX6	P78412	446 aa	Predicted RBP	18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	SLC10A5	Q5PT55	438 aa		18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	SUCLG2	Q96I99	432 aa		18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	UTY	O14607	1347 aa		18.42	■□□□□ 0.54
MATR3-238	ENST00000512107	GRM8	O00222	908 aa		18.41	■□□□□ 0.54
MATR3-238	ENST00000512107	IFFO2	Q5TF58	517 aa		18.41	■□□□□ 0.54
MATR3-238	ENST00000512107	TPTE2	Q6XPS3	522 aa		18.41	■□□□□ 0.54
MATR3-238	ENST00000512107	NLGN2	Q8NFZ4	835 aa		18.41	■□□□□ 0.54
MATR3-238	ENST00000512107	SH3TC1	Q8TE82	1336 aa		18.41	■□□□□ 0.54
MATR3-238	ENST00000512107	IRS4	O14654	1257 aa	Predicted RBP	18.4	■□□□□ 0.54
MATR3-238	ENST00000512107	ZBTB7B	O15156	539 aa	Predicted RBP	18.4	■□□□□ 0.54
MATR3-238	ENST00000512107	CHRNA5	P30532	468 aa		18.4	■□□□□ 0.54
MATR3-238	ENST00000512107	FOXO4	P98177	505 aa		18.4	■□□□□ 0.54
MATR3-238	ENST00000512107	CRBN	Q96SW2	442 aa		18.4	■□□□□ 0.54
MATR3-238	ENST00000512107	KCNA3	P22001	575 aa		18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	PDE3A	Q14432	1141 aa		18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	MVP	Q14764	893 aa	Known RBP	18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	ITPRIP	Q8IWB1	547 aa		18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	FTSJ3	Q8IY81	847 aa	Known RBP	18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	NYX	Q9GZU5	481 aa		18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	CDHR2	Q9BYE9	1310 aa		18.39	■□□□□ 0.53
MATR3-238	ENST00000512107	ANKRD44	Q8N8A2	993 aa		18.38	■□□□□ 0.53
MATR3-238	ENST00000512107	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.38	■□□□□ 0.53
MATR3-238	ENST00000512107	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.38	■□□□□ 0.53
MATR3-238	ENST00000512107	C1orf115	Q9H7X2	142 aa		18.38	■□□□□ 0.53
MATR3-238	ENST00000512107	RIC1	Q4ADV7	1423 aa		18.38	■□□□□ 0.53
MATR3-238	ENST00000512107	KLRG2	A4D1S0	409 aa	Predicted RBP	18.37	■□□□□ 0.53
MATR3-238	ENST00000512107	KLHL34	Q8N239	644 aa		18.37	■□□□□ 0.53
MATR3-238	ENST00000512107	BRIP1	Q9BX63	1249 aa		18.37	■□□□□ 0.53
MATR3-238	ENST00000512107	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.37	■□□□□ 0.53
MATR3-238	ENST00000512107	DLEC1	Q9Y238	1755 aa		18.37	■□□□□ 0.53
MATR3-238	ENST00000512107	MYH3	P11055	1940 aa		18.37	■□□□□ 0.53
MATR3-238	ENST00000512107		A0A0G2JLW4	131 aa		18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	DPEP1	P16444	411 aa		18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	BRCA1	P38398	1863 aa	Known RBP	18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	ST5	P78524	1137 aa		18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	PLA2G12B	Q9BX93	195 aa		18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.36	■□□□□ 0.53
MATR3-238	ENST00000512107	GTF2E1	P29083	439 aa	Predicted RBP	18.35	■□□□□ 0.53
MATR3-238	ENST00000512107	BICC1	Q9H694	974 aa	Known RBP	18.35	■□□□□ 0.53
MATR3-238	ENST00000512107	WWC3	Q9ULE0	1092 aa		18.35	■□□□□ 0.53
MATR3-238	ENST00000512107	LRRFIP2	Q9Y608	721 aa	Known RBP	18.35	■□□□□ 0.53
MATR3-238	ENST00000512107	CACNA1S	Q13698	1873 aa		18.35	■□□□□ 0.53
MATR3-238	ENST00000512107	PDE8A	O60658	829 aa		18.34	■□□□□ 0.53
MATR3-238	ENST00000512107	CRY2	Q49AN0	593 aa		18.34	■□□□□ 0.53
MATR3-238	ENST00000512107	C2CD5	Q86YS7	1000 aa		18.34	■□□□□ 0.53

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