RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 TUBGCP6Q96RT7 1819 aa11.43□□□□□ -0.58
NR1I3-228ENST00000511676 UBR3Q6ZT12 1888 aa11.42□□□□□ -0.58
NR1I3-228ENST00000511676 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
NR1I3-228ENST00000511676 NPHP1O15259 732 aa11.42□□□□□ -0.58
NR1I3-228ENST00000511676 PDE6BP35913 854 aa11.42□□□□□ -0.58
NR1I3-228ENST00000511676 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
NR1I3-228ENST00000511676 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-228ENST00000511676 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-228ENST00000511676 VEGFAP15692 232 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-228ENST00000511676 LMNB1P20700 586 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-228ENST00000511676 NARFQ9UHQ1 456 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 C10orf71Q711Q0 1435 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-228ENST00000511676 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 RGL2O15211 777 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 RNF181Q9P0P0 153 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-228ENST00000511676 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 TM4SF1P30408 202 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-228ENST00000511676 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 DSG3P32926 999 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-228ENST00000511676 ZNF652Q9Y2D9 606 aa11.38□□□□□ -0.59
NR1I3-228ENST00000511676 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-228ENST00000511676 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-228ENST00000511676 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-228ENST00000511676 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 CNKSR1Q969H4 720 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-228ENST00000511676 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
NR1I3-228ENST00000511676 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 SERPINB2P05120 415 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 ST5P78524 1137 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-228ENST00000511676 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
NR1I3-228ENST00000511676 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 IQCA1LA6NCM1 817 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 MYL6BP14649 208 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 KCNA3P22001 575 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
NR1I3-228ENST00000511676 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 INTS5Q6P9B9 1019 aaKnown RBP11.35□□□□□ -0.59
NR1I3-228ENST00000511676 CLEC4GQ6UXB4 293 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 RRAGCQ9HB90 399 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
NR1I3-228ENST00000511676 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-228ENST00000511676 ANXA1P04083 346 aa11.34□□□□□ -0.59
NR1I3-228ENST00000511676 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NR1I3-228ENST00000511676 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
NR1I3-228ENST00000511676 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-228ENST00000511676 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 GRM8O00222 908 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 A1BGP04217 495 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-228ENST00000511676 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 DNAJC5GQ8N7S2 189 aa11.33□□□□□ -0.6
NR1I3-228ENST00000511676 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms